Cluster: SW171_30_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: SW171_30
- CGC Family ID: CGCFAM_00996
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_110735 | k141_110735_194 | 167505 | 170102 | - | 3.A.9.1.2 |
| pfam | k141_110735 | k141_110735_195 | 170485 | 171189 | - | Flavodoxin_4 |
| TC | k141_110735 | k141_110735_196 | 171232 | 172119 | - | 8.A.5.1.4 |
| CAZyme | k141_110735 | k141_110735_197 | 172140 | 173951 | - | CE1 |
Gene ID: k141_110735_194
Type: TC
Location: 167505 - 170102 (-)
Type: TC
Location: 167505 - 170102 (-)
Gene ID: k141_110735_195
Type: pfam
Location: 170485 - 171189 (-)
Type: pfam
Location: 170485 - 171189 (-)
Gene ID: k141_110735_196
Type: TC
Location: 171232 - 172119 (-)
Type: TC
Location: 171232 - 172119 (-)
Gene ID: k141_110735_197
Type: CAZyme
Location: 172140 - 173951 (-)
Type: CAZyme
Location: 172140 - 173951 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_110735_196 | vegan > omnivore | 1.23122 | 0.00770 |
| k141_110735_197 | vegan > omnivore | 1.26824 | 0.00770 |