Cluster: SW171_30_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: SW171_30
- CGC Family ID: CGCFAM_10342
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_110735 | k141_110735_204 | 178956 | 180278 | + | 2.A.22.5.2 |
| pfam | k141_110735 | k141_110735_205 | 180305 | 181597 | - | GHMP_kinases_N | GalKase_gal_bdg |
| CAZyme | k141_110735 | k141_110735_206 | 181578 | 183974 | - | GH36 |
| TC | k141_110735 | k141_110735_207 | 183998 | 185368 | - | 2.A.2.1.1 |
Gene ID: k141_110735_204
Type: TC
Location: 178956 - 180278 (+)
Type: TC
Location: 178956 - 180278 (+)
Gene ID: k141_110735_205
Type: pfam
Location: 180305 - 181597 (-)
Type: pfam
Location: 180305 - 181597 (-)
Gene ID: k141_110735_206
Type: CAZyme
Location: 181578 - 183974 (-)
Type: CAZyme
Location: 181578 - 183974 (-)
Gene ID: k141_110735_207
Type: TC
Location: 183998 - 185368 (-)
Type: TC
Location: 183998 - 185368 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_110735_205 | vegan > omnivore | 2.34318 | 0.00770 |
| k141_110735_205 | vegetarian > omnivore | 1.99073 | 0.01456 |