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Genome Details

Selected Rep_genome_ID: Rep_569
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
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Phylum
Bacteroidota
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Class
Bacteroidia
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Order
Bacteroidales
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Family
Tannerellaceae
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Genus
Parabacteroides
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Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
Rep_569 5,279,235 99.5249% 1.08974% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_569_CGC12 CGCFAM_00001 Yes 5 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_569_CGC26 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_569_CGC27 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_569_CGC41 CGCFAM_00001 Yes 6 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_569_CGC7 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_569_CGC65 CGCFAM_00023 Yes 3 1
Rep_569_CGC72 CGCFAM_00023 Yes 4 2
Rep_569_CGC18 - Yes 8 2 N/A
Rep_569_CGC36 CGCFAM_00109 Yes 9 4 host glycan
Rep_569_CGC3 CGCFAM_00111 Yes 5 2 alpha-glucan
Rep_569_CGC10 CGCFAM_00147 Yes 3 1
Rep_569_CGC25 CGCFAM_00151 Yes 5 4
Rep_569_CGC75 CGCFAM_00158 Yes 9 3
Rep_569_CGC46 CGCFAM_00225 Yes 4 3 arabinogalactan
Rep_569_CGC61 CGCFAM_00274 Yes 6 3
Rep_569_CGC15 CGCFAM_00321 Yes 3 1
Rep_569_CGC68 CGCFAM_00360 Yes 5 2 host glycan
Rep_569_CGC71 CGCFAM_00482 Yes 4 2 fructan
Rep_569_CGC70 CGCFAM_00581 Yes 7 2
Rep_569_CGC62 CGCFAM_00760 Yes 3 1
Rep_569_CGC21 CGCFAM_00829 Yes 5 1
Rep_569_CGC37 CGCFAM_00829 Yes 7 2
Rep_569_CGC39 CGCFAM_01022 Yes 10 4
Rep_569_CGC24 CGCFAM_01059 Yes 5 1
Rep_569_CGC64 CGCFAM_01830 Yes 7 2
Top CAZyme Families