Cluster: Rep_569_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: Rep_569
- CGC Family ID: CGCFAM_00001
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_569_c_24 | Rep_569_c_24_9 | 12888 | 16289 | + | 1.B.14.6.1 |
| pfam | Rep_569_c_24 | Rep_569_c_24_10 | 16308 | 18125 | + | SusD_RagB | SusD-like_3 |
| sulfatase | Rep_569_c_24 | Rep_569_c_24_11 | 18276 | 19841 | + | S1_15 |
| CAZyme | Rep_569_c_24 | Rep_569_c_24_12 | 19855 | 22065 | + | GH92 |
Gene ID: Rep_569_c_24_9
Type: TC
Location: 12888 - 16289 (+)
Type: TC
Location: 12888 - 16289 (+)
Gene ID: Rep_569_c_24_10
Type: pfam
Location: 16308 - 18125 (+)
Type: pfam
Location: 16308 - 18125 (+)
Gene ID: Rep_569_c_24_11
Type: sulfatase
Location: 18276 - 19841 (+)
Type: sulfatase
Location: 18276 - 19841 (+)
Gene ID: Rep_569_c_24_12
Type: CAZyme
Location: 19855 - 22065 (+)
Type: CAZyme
Location: 19855 - 22065 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.