Cluster: Rep_569_CGC64
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_569
- CGC Family ID: CGCFAM_01830
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_569_c_367 | Rep_569_c_367_1 | 163 | 3294 | + | 1.B.14.6.1 |
| pfam | Rep_569_c_367 | Rep_569_c_367_2 | 3314 | 4768 | + | SusD_RagB | SusD-like_3 |
| CAZyme | Rep_569_c_367 | Rep_569_c_367_3 | 4793 | 6079 | + | GH33 |
| TC | Rep_569_c_367 | Rep_569_c_367_4 | 6092 | 8701 | + | 2.A.21.3.7 |
| pfam | Rep_569_c_367 | Rep_569_c_367_5 | 8691 | 10106 | + | FAD_binding_2 | GIDA | Thi4 | FAD_oxidored | NAD_binding_8 |
| NULL(UNKNOWN) | Rep_569_c_367 | Rep_569_c_367_6 | 10351 | 11196 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_569_c_367 | Rep_569_c_367_7 | 11252 | 12484 | - | GT30 |
Gene ID: Rep_569_c_367_1
Type: TC
Location: 163 - 3294 (+)
Type: TC
Location: 163 - 3294 (+)
Gene ID: Rep_569_c_367_2
Type: pfam
Location: 3314 - 4768 (+)
Type: pfam
Location: 3314 - 4768 (+)
Gene ID: Rep_569_c_367_3
Type: CAZyme
Location: 4793 - 6079 (+)
Type: CAZyme
Location: 4793 - 6079 (+)
Gene ID: Rep_569_c_367_4
Type: TC
Location: 6092 - 8701 (+)
Type: TC
Location: 6092 - 8701 (+)
Gene ID: Rep_569_c_367_5
Type: pfam
Location: 8691 - 10106 (+)
Type: pfam
Location: 8691 - 10106 (+)
Gene ID: Rep_569_c_367_6
Type:
Location: 10351 - 11196 (-)
Type:
Location: 10351 - 11196 (-)
Gene ID: Rep_569_c_367_7
Type: CAZyme
Location: 11252 - 12484 (-)
Type: CAZyme
Location: 11252 - 12484 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.