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Cluster: Rep_569_CGC75

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_569_c_418 Rep_569_c_418_11 15795 17447 - GH35
pfam Rep_569_c_418 Rep_569_c_418_12 17488 19092 - SusD_RagB | SusD-like_2 | SusD-like_3
TC Rep_569_c_418 Rep_569_c_418_13 19105 22539 - 1.B.14.6.1
STP Rep_569_c_418 Rep_569_c_418_14 22748 23803 - FecR
STP Rep_569_c_418 Rep_569_c_418_15 23934 24494 + Sigma70_r2 | Sigma70_r4_2
CAZyme Rep_569_c_418 Rep_569_c_418_16 24632 28390 - GH2 | GH2
CAZyme Rep_569_c_418 Rep_569_c_418_17 28394 29869 - GH30_2
TC Rep_569_c_418 Rep_569_c_418_18 29892 31430 - 8.A.46.1.3
TC Rep_569_c_418 Rep_569_c_418_19 31451 34825 - 1.B.14.6.1
Gene ID: Rep_569_c_418_11
Type: CAZyme
Location: 15795 - 17447 (-)
Gene ID: Rep_569_c_418_12
Type: pfam
Location: 17488 - 19092 (-)
Gene ID: Rep_569_c_418_13
Type: TC
Location: 19105 - 22539 (-)
Gene ID: Rep_569_c_418_14
Type: STP
Location: 22748 - 23803 (-)
Gene ID: Rep_569_c_418_15
Type: STP
Location: 23934 - 24494 (+)
Gene ID: Rep_569_c_418_16
Type: CAZyme
Location: 24632 - 28390 (-)
Gene ID: Rep_569_c_418_17
Type: CAZyme
Location: 28394 - 29869 (-)
Gene ID: Rep_569_c_418_18
Type: TC
Location: 29892 - 31430 (-)
Gene ID: Rep_569_c_418_19
Type: TC
Location: 31451 - 34825 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Tannerellaceae
→
Genus
Parabacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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