Genome Details
Selected Rep_genome_ID: Rep_480
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_480 | 5,182,311 | 96.8691% | 1.23916% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_480_CGC45 | CGCFAM_00646 | Yes | 11 | 5 | arabinogalactan |
| Rep_480_CGC14 | CGCFAM_00670 | Yes | 6 | 1 | |
| Rep_480_CGC28 | CGCFAM_00719 | Yes | 7 | 2 | beta-glucan |
| Rep_480_CGC31 | CGCFAM_00740 | Yes | 9 | 6 | |
| Rep_480_CGC30 | CGCFAM_00757 | Yes | 4 | 2 | |
| Rep_480_CGC38 | CGCFAM_00867 | Yes | 4 | 3 | |
| Rep_480_CGC15 | CGCFAM_01079 | Yes | 10 | 3 | beta-glucan |
| Rep_480_CGC69 | CGCFAM_01176 | Yes | 12 | 8 | |
| Rep_480_CGC44 | CGCFAM_01251 | Yes | 6 | 4 | |
| Rep_480_CGC42 | CGCFAM_01256 | Yes | 6 | 1 | |
| Rep_480_CGC58 | CGCFAM_01517 | Yes | 5 | 3 | |
| Rep_480_CGC3 | CGCFAM_01620 | Yes | 3 | 1 | |
| Rep_480_CGC43 | CGCFAM_01646 | Yes | 7 | 2 | |
| Rep_480_CGC35 | CGCFAM_01912 | Yes | 5 | 2 | |
| Rep_480_CGC2 | CGCFAM_02278 | Yes | 13 | 8 | |
| Rep_480_CGC13 | CGCFAM_02294 | Yes | 16 | 3 | |
| Rep_480_CGC36 | CGCFAM_02323 | Yes | 7 | 1 | |
| Rep_480_CGC61 | CGCFAM_02325 | Yes | 7 | 3 | |
| Rep_480_CGC41 | CGCFAM_02747 | Yes | 4 | 2 | |
| Rep_480_CGC78 | CGCFAM_03182 | Yes | 4 | 3 | |
| Rep_480_CGC52 | CGCFAM_03946 | Yes | 4 | 1 | |
| Rep_480_CGC51 | CGCFAM_04195 | Yes | 11 | 4 | |
| Rep_480_CGC63 | CGCFAM_05404 | Yes | 6 | 3 | |
| Rep_480_CGC68 | CGCFAM_05853 | Yes | 5 | 1 | |
| Rep_480_CGC74 | CGCFAM_05923 | Yes | 10 | 5 |
Top CAZyme Families