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Cluster: Rep_480_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_480_c_112 Rep_480_c_112_1 547 2808 + CE20 | CE20
CAZyme Rep_480_c_112 Rep_480_c_112_2 2835 5861 + CBM96
CAZyme Rep_480_c_112 Rep_480_c_112_3 5880 8084 + GH92
sulfatase Rep_480_c_112 Rep_480_c_112_4 8136 9440 + S1_24
CAZyme Rep_480_c_112 Rep_480_c_112_5 9575 11953 + GH154 | GH88
TC Rep_480_c_112 Rep_480_c_112_6 11980 15021 + 1.B.14.6.1
pfam Rep_480_c_112 Rep_480_c_112_7 15035 16654 + SusD_RagB | SusD-like_3
CAZyme Rep_480_c_112 Rep_480_c_112_8 16675 18477 + CBM32 | GH43_28
CAZyme Rep_480_c_112 Rep_480_c_112_9 18505 21054 + GH154
Gene ID: Rep_480_c_112_1
Type: CAZyme
Location: 547 - 2808 (+)
Gene ID: Rep_480_c_112_2
Type: CAZyme
Location: 2835 - 5861 (+)
Gene ID: Rep_480_c_112_3
Type: CAZyme
Location: 5880 - 8084 (+)
Gene ID: Rep_480_c_112_4
Type: sulfatase
Location: 8136 - 9440 (+)
Gene ID: Rep_480_c_112_5
Type: CAZyme
Location: 9575 - 11953 (+)
Gene ID: Rep_480_c_112_6
Type: TC
Location: 11980 - 15021 (+)
Gene ID: Rep_480_c_112_7
Type: pfam
Location: 15035 - 16654 (+)
Gene ID: Rep_480_c_112_8
Type: CAZyme
Location: 16675 - 18477 (+)
Gene ID: Rep_480_c_112_9
Type: CAZyme
Location: 18505 - 21054 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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