Cluster: Rep_480_CGC51
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_480
- CGC Family ID: CGCFAM_04195
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_480_c_176 | Rep_480_c_176_1 | 56 | 1087 | - | 2.A.7.6.1 |
| pfam | Rep_480_c_176 | Rep_480_c_176_2 | 1107 | 2360 | - | RhaA |
| pfam | Rep_480_c_176 | Rep_480_c_176_3 | 2393 | 3862 | - | FGGY_N | FGGY_C |
| CAZyme | Rep_480_c_176 | Rep_480_c_176_4 | 4008 | 6875 | - | GH106 |
| CAZyme | Rep_480_c_176 | Rep_480_c_176_5 | 7087 | 9609 | - | CE20 | GH105 |
| pfam | Rep_480_c_176 | Rep_480_c_176_6 | 9856 | 11580 | + | PDDEXK_9 | AAA-ATPase_like |
| pfam | Rep_480_c_176 | Rep_480_c_176_7 | 11686 | 13356 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_480_c_176 | Rep_480_c_176_8 | 13400 | 16537 | - | 1.B.14.6.1 |
| CAZyme | Rep_480_c_176 | Rep_480_c_176_9 | 16772 | 17908 | + | CE1 |
| NULL(UNKNOWN) | Rep_480_c_176 | Rep_480_c_176_10 | 17936 | 18634 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_480_c_176 | Rep_480_c_176_11 | 18637 | 20088 | + | GH43_7 | GH43_7 |
Gene ID: Rep_480_c_176_1
Type: TC
Location: 56 - 1087 (-)
Type: TC
Location: 56 - 1087 (-)
Gene ID: Rep_480_c_176_2
Type: pfam
Location: 1107 - 2360 (-)
Type: pfam
Location: 1107 - 2360 (-)
Gene ID: Rep_480_c_176_3
Type: pfam
Location: 2393 - 3862 (-)
Type: pfam
Location: 2393 - 3862 (-)
Gene ID: Rep_480_c_176_4
Type: CAZyme
Location: 4008 - 6875 (-)
Type: CAZyme
Location: 4008 - 6875 (-)
Gene ID: Rep_480_c_176_5
Type: CAZyme
Location: 7087 - 9609 (-)
Type: CAZyme
Location: 7087 - 9609 (-)
Gene ID: Rep_480_c_176_6
Type: pfam
Location: 9856 - 11580 (+)
Type: pfam
Location: 9856 - 11580 (+)
Gene ID: Rep_480_c_176_7
Type: pfam
Location: 11686 - 13356 (-)
Type: pfam
Location: 11686 - 13356 (-)
Gene ID: Rep_480_c_176_8
Type: TC
Location: 13400 - 16537 (-)
Type: TC
Location: 13400 - 16537 (-)
Gene ID: Rep_480_c_176_9
Type: CAZyme
Location: 16772 - 17908 (+)
Type: CAZyme
Location: 16772 - 17908 (+)
Gene ID: Rep_480_c_176_10
Type:
Location: 17936 - 18634 (+)
Type:
Location: 17936 - 18634 (+)
Gene ID: Rep_480_c_176_11
Type: CAZyme
Location: 18637 - 20088 (+)
Type: CAZyme
Location: 18637 - 20088 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.