PROTEIN: Rep_480_c_176_10
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Protein File & Metadata
Source:
Rep_480_c_176_10.pdb
Genome ID:
Protein ID:
Rep_480_c_176_10
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Protein Sequence
MKTFYHKPLL AIGFALLMGL HGYAQKSGTD SRLAPYFSPG TTHVMSPDDE GFIRRWLLLE 60 PIDKPNRSNT VFTDSYIREA FTTEYFPQQF TILPKDGDKV KVGKQKLTWH ALDSNLFNVK 120 LFRFASLLGK QFYGVLFWAV TVVECPEDMP NVRMSVGSNS ASMWWLNGEE AVILSGDRRM 180 VKDDCLSRRL TLKKGKNIIR GAVINGPGMS DFCLRFLNEN GTPVKNITIS YK 232
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q92344-F1-model_v4 | 42 | 232 | 168 | 362 | 0.4495 |
0.678 |
| AF-Q6L8S8-F1-model_v4 | 41 | 232 | 116 | 283 | 0.3291 |
0.7202 |
| AF-E7FE27-F1-model_v4 | 42 | 232 | 118 | 286 | 0.3056 |
0.6839 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 28 | 232 | 379 | 701 | 0.5655 |
0.9664 |
| AF-D5EXY9-F1-model_v4 | CBM6 , GH43_2 | 28 | 232 | 383 | 700 | 0.5602 |
0.9561 |
| AF-D7SFH3-F1-model_v4 | GH43_2 | 31 | 232 | 483 | 697 | 0.5557 |
0.9609 |
| AF-A0A7G9XVI1-F1-model_v4 | GH43_2 , GH8 | 31 | 232 | 844 | 1048 | 0.5085 |
0.9607 |
| AF-A0A068NPW6-F1-model_v4 | GH0 | 6 | 232 | 1 | 214 | 0.4732 |
0.7906 |
| AF-A0A2S0KVC0-F1-model_v4 | GH0 | 7 | 232 | 41 | 278 | 0.4336 |
0.7557 |
| AF-A0A344TID5-F1-model_v4 | GH163 | 16 | 222 | 13 | 202 | 0.4306 |
0.8221 |
| A0A380YJ87 | GH20 | 16 | 232 | 242 | 837 | 0.4261 |
0.7176 |
| AF-A0A415S3H1-F1-model_v4 | GH20 | 15 | 232 | 244 | 837 | 0.4259 |
0.7141 |
| AF-A0A402CZV5-F1-model_v4 | GH4 | 47 | 221 | 458 | 622 | 0.4249 |
0.86 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 28 | 232 | 379 | 701 | 0.5655 |
0.9664 |
| D7SFH3 | GH43_2 | 31 | 232 | 483 | 697 | 0.5557 |
0.9609 |
| A0A7G9XVI1 | GH43_2 , GH8 | 31 | 232 | 844 | 1048 | 0.5085 |
0.9607 |
| A0A344TID5 | GH163 | 16 | 222 | 13 | 202 | 0.4306 |
0.8221 |
| A0A380YJ87 | GH20 | 16 | 232 | 242 | 837 | 0.4261 |
0.7176 |
| A0A402CZV5 | GH4 | 47 | 221 | 458 | 622 | 0.4249 |
0.86 |
| A0A1U9NQX6 | CBM51 , GH20 | 14 | 232 | 48 | 853 | 0.4165 |
0.6989 |
| BCM93550.1 | GH2 | 40 | 232 | 948 | 1135 | 0.3994 |
0.8165 |
| A0A518LMX6 | GH31 | 43 | 232 | 945 | 1147 | 0.3992 |
0.8121 |
| A0A495VIY0 | GH2 | 43 | 232 | 933 | 1116 | 0.394 |
0.8185 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q92344-F1-model_v4 | 42 | 232 | 168 | 362 | 0.4495 |
0.678 |
| AF-Q6L8S8-F1-model_v4 | 41 | 232 | 116 | 283 | 0.3291 |
0.7202 |