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Cluster: Rep_480_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_480_c_68 Rep_480_c_68_1 169 1641 - GH5_4
pfam Rep_480_c_68 Rep_480_c_68_2 1671 3128 - TIG | SGBP_B_XBD
pfam Rep_480_c_68 Rep_480_c_68_3 3167 4834 - SusD_RagB | SusD-like_3
TC Rep_480_c_68 Rep_480_c_68_4 4834 8010 - 1.B.14.6.1
TF Rep_480_c_68 Rep_480_c_68_5 8129 12151 - HTH_AraC
NULL(UNKNOWN) Rep_480_c_68 Rep_480_c_68_6 12214 12375 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_480_c_68 Rep_480_c_68_7 12667 14982 + PL21_1
CAZyme Rep_480_c_68 Rep_480_c_68_8 15081 17438 - GH2
TC Rep_480_c_68 Rep_480_c_68_9 17463 19169 - 8.A.46.1.6
TC Rep_480_c_68 Rep_480_c_68_10 19183 22263 - 1.B.14.6.1
Gene ID: Rep_480_c_68_1
Type: CAZyme
Location: 169 - 1641 (-)
Gene ID: Rep_480_c_68_2
Type: pfam
Location: 1671 - 3128 (-)
Gene ID: Rep_480_c_68_3
Type: pfam
Location: 3167 - 4834 (-)
Gene ID: Rep_480_c_68_4
Type: TC
Location: 4834 - 8010 (-)
Gene ID: Rep_480_c_68_5
Type: TF
Location: 8129 - 12151 (-)
Gene ID: Rep_480_c_68_6
Type:
Location: 12214 - 12375 (+)
Gene ID: Rep_480_c_68_7
Type: CAZyme
Location: 12667 - 14982 (+)
Gene ID: Rep_480_c_68_8
Type: CAZyme
Location: 15081 - 17438 (-)
Gene ID: Rep_480_c_68_9
Type: TC
Location: 17463 - 19169 (-)
Gene ID: Rep_480_c_68_10
Type: TC
Location: 19183 - 22263 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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