Genome Details
Selected Rep_genome_ID: Rep_3473
Total Genomes Found: 8
Total Genomes Found: 8
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS363
Species
UMGS363 sp900543105
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR019578 | 2,324,977 | 95.3% | 0% | China | Asia | CGMR |
| DM151_maxbin.016 | 2,591,077 | 97.99% | 0% | NA | Africa | H3AfricaPhase2 |
| GCA_021623825.1_ASM2162382v1_genomic | 3,059,686 | 93.29% | 0.34% | NA | Africa | H3AfricaPhase1 |
| GCA_021626565.1_ASM2162656v1_genomic | 2,549,706 | 94.63% | 0% | NA | Africa | H3AfricaPhase1 |
| GH064_38 | 2,830,296 | 97.99% | 0% | NA | Africa | H3AfricaPhase2 |
| MGYG000001987 | 2,697,227 | 97.99% | 0% | Spain | Europe | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_PheChl_Fiber-Hadza-Nepal_C_12_2317.269 | 2,697,725 | 97.99% | 0% | NA | Africa | Hadza |
| Rep_3473 | 3,053,286 | 97.9866% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_3473_CGC25 | CGCFAM_00190 | Yes | 5 | 2 | |
| Rep_3473_CGC6 | CGCFAM_01026 | Yes | 10 | 1 | |
| Rep_3473_CGC21 | CGCFAM_01968 | Yes | 3 | 1 | |
| Rep_3473_CGC2 | CGCFAM_02034 | Yes | 6 | 2 | |
| Rep_3473_CGC18 | CGCFAM_02694 | Yes | 11 | 2 | |
| Rep_3473_CGC5 | CGCFAM_02695 | Yes | 4 | 1 | |
| Rep_3473_CGC14 | CGCFAM_06038 | Yes | 11 | 1 | |
| Rep_3473_CGC7 | CGCFAM_06294 | Yes | 7 | 3 | |
| Rep_3473_CGC16 | CGCFAM_11164 | Yes | 5 | 2 | |
| Rep_3473_CGC27 | CGCFAM_11279 | Yes | 3 | 1 |
Top CAZyme Families