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Cluster: Rep_3473_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3473_c_1 Rep_3473_c_1_1436 1578623 1581133 + 9.A.8.1.9
TF Rep_3473_c_1 Rep_3473_c_1_1437 1581393 1581767 + Fe_dep_repress
NULL(UNKNOWN) Rep_3473_c_1 Rep_3473_c_1_1438 1581814 1582179 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3473_c_1 Rep_3473_c_1_1439 1582169 1582771 + 8.A.59.4.1
NULL(UNKNOWN) Rep_3473_c_1 Rep_3473_c_1_1440 1583004 1583249 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3473_c_1 Rep_3473_c_1_1441 1583249 1585339 + 3.A.3.32.6
TC Rep_3473_c_1 Rep_3473_c_1_1442 1586088 1586873 + 2.A.5.5.2
TC Rep_3473_c_1 Rep_3473_c_1_1443 1587121 1587819 + 3.A.1.134.3
pfam Rep_3473_c_1 Rep_3473_c_1_1444 1587832 1590807 + FtsX | FtsX
pfam Rep_3473_c_1 Rep_3473_c_1_1445 1590990 1592000 + adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | KR | GDP_Man_Dehyd
CAZyme Rep_3473_c_1 Rep_3473_c_1_1446 1592364 1593641 - GH18
Gene ID: Rep_3473_c_1_1436
Type: TC
Location: 1578623 - 1581133 (+)
Gene ID: Rep_3473_c_1_1437
Type: TF
Location: 1581393 - 1581767 (+)
Gene ID: Rep_3473_c_1_1438
Type:
Location: 1581814 - 1582179 (+)
Gene ID: Rep_3473_c_1_1439
Type: TC
Location: 1582169 - 1582771 (+)
Gene ID: Rep_3473_c_1_1440
Type:
Location: 1583004 - 1583249 (+)
Gene ID: Rep_3473_c_1_1441
Type: TC
Location: 1583249 - 1585339 (+)
Gene ID: Rep_3473_c_1_1442
Type: TC
Location: 1586088 - 1586873 (+)
Gene ID: Rep_3473_c_1_1443
Type: TC
Location: 1587121 - 1587819 (+)
Gene ID: Rep_3473_c_1_1444
Type: pfam
Location: 1587832 - 1590807 (+)
Gene ID: Rep_3473_c_1_1445
Type: pfam
Location: 1590990 - 1592000 (+)
Gene ID: Rep_3473_c_1_1446
Type: CAZyme
Location: 1592364 - 1593641 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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