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Cluster: Rep_3473_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3473_c_2 Rep_3473_c_2_121 153224 155920 + GH2
TC Rep_3473_c_2 Rep_3473_c_2_122 155926 157266 + 2.A.66.1.33
pfam Rep_3473_c_2 Rep_3473_c_2_123 158252 158935 - DUF4358
TC Rep_3473_c_2 Rep_3473_c_2_124 159100 160059 - 2.A.19.5.2
STP Rep_3473_c_2 Rep_3473_c_2_125 160277 162511 - GGDEF | dCache_1
CAZyme Rep_3473_c_2 Rep_3473_c_2_126 162702 164741 - GH44
TC Rep_3473_c_2 Rep_3473_c_2_127 164882 165991 - 2.A.45.2.6
TC Rep_3473_c_2 Rep_3473_c_2_128 166007 166936 - 2.A.119.2.1
peptidase Rep_3473_c_2 Rep_3473_c_2_129 167110 168642 + C26.957
NULL(UNKNOWN) Rep_3473_c_2 Rep_3473_c_2_130 168881 168973 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3473_c_2 Rep_3473_c_2_131 169071 170372 + 8.A.59.4.1
Gene ID: Rep_3473_c_2_121
Type: CAZyme
Location: 153224 - 155920 (+)
Gene ID: Rep_3473_c_2_122
Type: TC
Location: 155926 - 157266 (+)
Gene ID: Rep_3473_c_2_123
Type: pfam
Location: 158252 - 158935 (-)
Gene ID: Rep_3473_c_2_124
Type: TC
Location: 159100 - 160059 (-)
Gene ID: Rep_3473_c_2_125
Type: STP
Location: 160277 - 162511 (-)
Gene ID: Rep_3473_c_2_126
Type: CAZyme
Location: 162702 - 164741 (-)
Gene ID: Rep_3473_c_2_127
Type: TC
Location: 164882 - 165991 (-)
Gene ID: Rep_3473_c_2_128
Type: TC
Location: 166007 - 166936 (-)
Gene ID: Rep_3473_c_2_129
Type: peptidase
Location: 167110 - 168642 (+)
Gene ID: Rep_3473_c_2_130
Type:
Location: 168881 - 168973 (+)
Gene ID: Rep_3473_c_2_131
Type: TC
Location: 169071 - 170372 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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