Cluster: Rep_3473_CGC27
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3473
- CGC Family ID: CGCFAM_11279
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3473_c_2 | Rep_3473_c_2_889 | 953855 | 955924 | - | GH43_16 |
| TF | Rep_3473_c_2 | Rep_3473_c_2_890 | 956115 | 958217 | + | HTH_AraC |
| TC | Rep_3473_c_2 | Rep_3473_c_2_891 | 958376 | 966961 | - | 8.A.42.1.3 |
Gene ID: Rep_3473_c_2_889
Type: CAZyme
Location: 953855 - 955924 (-)
Type: CAZyme
Location: 953855 - 955924 (-)
Gene ID: Rep_3473_c_2_890
Type: TF
Location: 956115 - 958217 (+)
Type: TF
Location: 956115 - 958217 (+)
Gene ID: Rep_3473_c_2_891
Type: TC
Location: 958376 - 966961 (-)
Type: TC
Location: 958376 - 966961 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS363
Species
UMGS363 sp900543105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.