Cluster: Rep_3473_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3473
- CGC Family ID: CGCFAM_06294
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3473_c_1 | Rep_3473_c_1_722 | 790377 | 791570 | - | 3.A.11.1.3 |
| pfam | Rep_3473_c_1 | Rep_3473_c_1_723 | 792096 | 793454 | + | ELFV_dehydrog | ELFV_dehydrog_N |
| CAZyme | Rep_3473_c_1 | Rep_3473_c_1_724 | 793850 | 794902 | - | CE2 |
| CAZyme | Rep_3473_c_1 | Rep_3473_c_1_725 | 795096 | 796727 | + | GH9 |
| pfam | Rep_3473_c_1 | Rep_3473_c_1_726 | 797506 | 798255 | + | TraX |
| pfam | Rep_3473_c_1 | Rep_3473_c_1_727 | 798280 | 798762 | + | tRNA_edit |
| CAZyme | Rep_3473_c_1 | Rep_3473_c_1_728 | 798942 | 800222 | + | CE17 |
Gene ID: Rep_3473_c_1_722
Type: TC
Location: 790377 - 791570 (-)
Type: TC
Location: 790377 - 791570 (-)
Gene ID: Rep_3473_c_1_723
Type: pfam
Location: 792096 - 793454 (+)
Type: pfam
Location: 792096 - 793454 (+)
Gene ID: Rep_3473_c_1_724
Type: CAZyme
Location: 793850 - 794902 (-)
Type: CAZyme
Location: 793850 - 794902 (-)
Gene ID: Rep_3473_c_1_725
Type: CAZyme
Location: 795096 - 796727 (+)
Type: CAZyme
Location: 795096 - 796727 (+)
Gene ID: Rep_3473_c_1_726
Type: pfam
Location: 797506 - 798255 (+)
Type: pfam
Location: 797506 - 798255 (+)
Gene ID: Rep_3473_c_1_727
Type: pfam
Location: 798280 - 798762 (+)
Type: pfam
Location: 798280 - 798762 (+)
Gene ID: Rep_3473_c_1_728
Type: CAZyme
Location: 798942 - 800222 (+)
Type: CAZyme
Location: 798942 - 800222 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS363
Species
UMGS363 sp900543105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.