Cluster: Rep_3473_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3473
- CGC Family ID: CGCFAM_11164
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3473_c_2 | Rep_3473_c_2_53 | 59295 | 62786 | + | GH2 |
| CAZyme | Rep_3473_c_2 | Rep_3473_c_2_54 | 62799 | 64589 | + | GH146 |
| TC | Rep_3473_c_2 | Rep_3473_c_2_55 | 65243 | 66646 | - | 1.B.52.2.1 |
| peptidase | Rep_3473_c_2 | Rep_3473_c_2_56 | 66885 | 67811 | + | M15.UPB |
| TC | Rep_3473_c_2 | Rep_3473_c_2_57 | 67908 | 69281 | - | 8.A.59.4.1 |
Gene ID: Rep_3473_c_2_53
Type: CAZyme
Location: 59295 - 62786 (+)
Type: CAZyme
Location: 59295 - 62786 (+)
Gene ID: Rep_3473_c_2_54
Type: CAZyme
Location: 62799 - 64589 (+)
Type: CAZyme
Location: 62799 - 64589 (+)
Gene ID: Rep_3473_c_2_55
Type: TC
Location: 65243 - 66646 (-)
Type: TC
Location: 65243 - 66646 (-)
Gene ID: Rep_3473_c_2_56
Type: peptidase
Location: 66885 - 67811 (+)
Type: peptidase
Location: 66885 - 67811 (+)
Gene ID: Rep_3473_c_2_57
Type: TC
Location: 67908 - 69281 (-)
Type: TC
Location: 67908 - 69281 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS363
Species
UMGS363 sp900543105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.