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Cluster: Rep_3473_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3473_c_1 Rep_3473_c_1_598 668447 668962 + 2.A.87.3.2
TC Rep_3473_c_1 Rep_3473_c_1_599 669414 670709 + 3.D.6.1.2
TC Rep_3473_c_1 Rep_3473_c_1_600 670724 671698 + 3.D.6.1.2
pfam Rep_3473_c_1 Rep_3473_c_1_601 671698 672354 + FMN_bind
TC Rep_3473_c_1 Rep_3473_c_1_602 672347 673033 + 3.D.6.1.2
TC Rep_3473_c_1 Rep_3473_c_1_603 673033 673611 + 3.D.6.1.2
TC Rep_3473_c_1 Rep_3473_c_1_604 673628 674596 + 3.D.6.1.2
pfam Rep_3473_c_1 Rep_3473_c_1_605 674762 675046 + RelB
pfam Rep_3473_c_1 Rep_3473_c_1_606 675039 675296 + YoeB_toxin
CAZyme Rep_3473_c_1 Rep_3473_c_1_607 675660 678056 - GT35
Gene ID: Rep_3473_c_1_598
Type: TC
Location: 668447 - 668962 (+)
Gene ID: Rep_3473_c_1_599
Type: TC
Location: 669414 - 670709 (+)
Gene ID: Rep_3473_c_1_600
Type: TC
Location: 670724 - 671698 (+)
Gene ID: Rep_3473_c_1_601
Type: pfam
Location: 671698 - 672354 (+)
Gene ID: Rep_3473_c_1_602
Type: TC
Location: 672347 - 673033 (+)
Gene ID: Rep_3473_c_1_603
Type: TC
Location: 673033 - 673611 (+)
Gene ID: Rep_3473_c_1_604
Type: TC
Location: 673628 - 674596 (+)
Gene ID: Rep_3473_c_1_605
Type: pfam
Location: 674762 - 675046 (+)
Gene ID: Rep_3473_c_1_606
Type: pfam
Location: 675039 - 675296 (+)
Gene ID: Rep_3473_c_1_607
Type: CAZyme
Location: 675660 - 678056 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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