Cluster: Rep_3473_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3473
- CGC Family ID: CGCFAM_02034
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3473_c_0 | Rep_3473_c_0_90 | 98523 | 100592 | + | GH5_1 |
| pfam | Rep_3473_c_0 | Rep_3473_c_0_91 | 100876 | 101226 | - | T4SS-DNA_transf | TrwB_AAD_bind | TraG-D_C |
| NULL(UNKNOWN) | Rep_3473_c_0 | Rep_3473_c_0_92 | 101436 | 102014 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3473_c_0 | Rep_3473_c_0_93 | 102233 | 102940 | - | 3.A.16.1.3 |
| pfam | Rep_3473_c_0 | Rep_3473_c_0_94 | 102961 | 104010 | - | Peptidase_C39_2 |
| CAZyme | Rep_3473_c_0 | Rep_3473_c_0_95 | 104026 | 107376 | - | GH2 |
Gene ID: Rep_3473_c_0_90
Type: CAZyme
Location: 98523 - 100592 (+)
Type: CAZyme
Location: 98523 - 100592 (+)
Gene ID: Rep_3473_c_0_91
Type: pfam
Location: 100876 - 101226 (-)
Type: pfam
Location: 100876 - 101226 (-)
Gene ID: Rep_3473_c_0_92
Type:
Location: 101436 - 102014 (-)
Type:
Location: 101436 - 102014 (-)
Gene ID: Rep_3473_c_0_93
Type: TC
Location: 102233 - 102940 (-)
Type: TC
Location: 102233 - 102940 (-)
Gene ID: Rep_3473_c_0_94
Type: pfam
Location: 102961 - 104010 (-)
Type: pfam
Location: 102961 - 104010 (-)
Gene ID: Rep_3473_c_0_95
Type: CAZyme
Location: 104026 - 107376 (-)
Type: CAZyme
Location: 104026 - 107376 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS363
Species
UMGS363 sp900543105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.