Genome Details
Selected Rep_genome_ID: Rep_311
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_311 | 3,320,822 | 97.044% | 1.13208% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_311_CGC15 | CGCFAM_00001 | Yes | 9 | 4 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_311_CGC35 | CGCFAM_00031 | Yes | 7 | 2 | pectin/galactan |
| Rep_311_CGC8 | CGCFAM_00145 | Yes | 9 | 3 | |
| Rep_311_CGC38 | CGCFAM_00146 | Yes | 3 | 2 | |
| Rep_311_CGC32 | CGCFAM_00395 | Yes | 25 | 4 | |
| Rep_311_CGC10 | CGCFAM_00574 | Yes | 18 | 3 | |
| Rep_311_CGC7 | CGCFAM_00657 | Yes | 4 | 1 | |
| Rep_311_CGC40 | CGCFAM_00820 | Yes | 7 | 1 | beta-glucan |
| Rep_311_CGC28 | CGCFAM_01017 | Yes | 6 | 2 | |
| Rep_311_CGC33 | CGCFAM_01461 | Yes | 15 | 1 | |
| Rep_311_CGC44 | CGCFAM_01462 | Yes | 15 | 7 | |
| Rep_311_CGC24 | CGCFAM_02949 | Yes | 13 | 3 | |
| Rep_311_CGC19 | CGCFAM_04496 | Yes | 9 | 1 | |
| Rep_311_CGC43 | CGCFAM_05975 | Yes | 5 | 1 | |
| Rep_311_CGC41 | CGCFAM_10780 | Yes | 4 | 1 | |
| Rep_311_CGC30 | CGCFAM_10781 | Yes | 8 | 7 | |
| Rep_311_CGC3 | CGCFAM_10900 | Yes | 17 | 7 |
Top CAZyme Families