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Cluster: Rep_311_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_311_c_74 Rep_311_c_74_13 12223 13200 + 2.A.4.7.9
pfam Rep_311_c_74 Rep_311_c_74_14 13359 14120 + CMD
TC Rep_311_c_74 Rep_311_c_74_15 14236 16941 - 3.A.3.2.17
pfam Rep_311_c_74 Rep_311_c_74_16 17116 18321 + Phage_integrase | Phage_int_SAM_5
TC Rep_311_c_74 Rep_311_c_74_17 18849 20762 + 3.A.24.1.1
pfam Rep_311_c_74 Rep_311_c_74_18 20799 21497 - Vut_1
pfam Rep_311_c_74 Rep_311_c_74_19 21640 23097 + TRAM | tRNA_U5-meth_tr | Methyltransf_25 | Methyltransf_31
TC Rep_311_c_74 Rep_311_c_74_20 23169 24176 + 1.A.23.2.1
STP Rep_311_c_74 Rep_311_c_74_21 24199 25707 - Pyr_redox_2
pfam Rep_311_c_74 Rep_311_c_74_22 25704 26465 - DHODB_Fe-S_bind
TC Rep_311_c_74 Rep_311_c_74_23 26477 27184 - 3.A.25.1.1
CAZyme Rep_311_c_74 Rep_311_c_74_24 27304 28731 + GH13_28
pfam Rep_311_c_74 Rep_311_c_74_25 28965 29237 + Cpn10
pfam Rep_311_c_74 Rep_311_c_74_26 29331 30968 + Cpn60_TCP1
TC Rep_311_c_74 Rep_311_c_74_27 31150 31995 + 3.A.1.15.1
Gene ID: Rep_311_c_74_13
Type: TC
Location: 12223 - 13200 (+)
Gene ID: Rep_311_c_74_14
Type: pfam
Location: 13359 - 14120 (+)
Gene ID: Rep_311_c_74_15
Type: TC
Location: 14236 - 16941 (-)
Gene ID: Rep_311_c_74_16
Type: pfam
Location: 17116 - 18321 (+)
Gene ID: Rep_311_c_74_17
Type: TC
Location: 18849 - 20762 (+)
Gene ID: Rep_311_c_74_18
Type: pfam
Location: 20799 - 21497 (-)
Gene ID: Rep_311_c_74_19
Type: pfam
Location: 21640 - 23097 (+)
Gene ID: Rep_311_c_74_20
Type: TC
Location: 23169 - 24176 (+)
Gene ID: Rep_311_c_74_21
Type: STP
Location: 24199 - 25707 (-)
Gene ID: Rep_311_c_74_22
Type: pfam
Location: 25704 - 26465 (-)
Gene ID: Rep_311_c_74_23
Type: TC
Location: 26477 - 27184 (-)
Gene ID: Rep_311_c_74_24
Type: CAZyme
Location: 27304 - 28731 (+)
Gene ID: Rep_311_c_74_25
Type: pfam
Location: 28965 - 29237 (+)
Gene ID: Rep_311_c_74_26
Type: pfam
Location: 29331 - 30968 (+)
Gene ID: Rep_311_c_74_27
Type: TC
Location: 31150 - 31995 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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