dbCAN Logo

Cluster: Rep_311_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_311_c_10 Rep_311_c_10_16 18512 19966 - GH128
CAZyme Rep_311_c_10 Rep_311_c_10_17 19956 22208 - GH3
CAZyme Rep_311_c_10 Rep_311_c_10_18 22205 23389 - GH16_3
NULL(UNKNOWN) Rep_311_c_10 Rep_311_c_10_19 23479 24417 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_311_c_10 Rep_311_c_10_20 24534 26129 - 8.A.46.1.4
TC Rep_311_c_10 Rep_311_c_10_21 26165 29278 - 1.B.14.6.1
NULL(UNKNOWN) Rep_311_c_10 Rep_311_c_10_22 29508 29609 + NULL(UNKNOWN)
[View Structural Homologs]
TF Rep_311_c_10 Rep_311_c_10_23 29711 32551 + GerE
TC Rep_311_c_10 Rep_311_c_10_24 32580 34628 - 1.B.14.10.1
Gene ID: Rep_311_c_10_16
Type: CAZyme
Location: 18512 - 19966 (-)
Gene ID: Rep_311_c_10_17
Type: CAZyme
Location: 19956 - 22208 (-)
Gene ID: Rep_311_c_10_18
Type: CAZyme
Location: 22205 - 23389 (-)
Gene ID: Rep_311_c_10_19
Type:
Location: 23479 - 24417 (-)
Gene ID: Rep_311_c_10_20
Type: TC
Location: 24534 - 26129 (-)
Gene ID: Rep_311_c_10_21
Type: TC
Location: 26165 - 29278 (-)
Gene ID: Rep_311_c_10_22
Type:
Location: 29508 - 29609 (+)
Gene ID: Rep_311_c_10_23
Type: TF
Location: 29711 - 32551 (+)
Gene ID: Rep_311_c_10_24
Type: TC
Location: 32580 - 34628 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List