Cluster: Rep_311_CGC44
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_311
- CGC Family ID: CGCFAM_01462
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_311_c_98 | Rep_311_c_98_68 | 66761 | 67921 | + | GT4 |
| CAZyme | Rep_311_c_98 | Rep_311_c_98_69 | 68037 | 68831 | + | GT26 |
| pfam | Rep_311_c_98 | Rep_311_c_98_70 | 69085 | 70176 | + | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| TC | Rep_311_c_98 | Rep_311_c_98_71 | 70217 | 71440 | + | 2.A.1.7.2 |
| pfam | Rep_311_c_98 | Rep_311_c_98_72 | 71448 | 72605 | + | CTP_transf_like | GHMP_kinases_C |
| pfam | Rep_311_c_98 | Rep_311_c_98_73 | 72602 | 73585 | + | NTP_transferase | NTP_transf_3 |
| CAZyme | Rep_311_c_98 | Rep_311_c_98_74 | 73703 | 76030 | - | GH3 |
| CAZyme | Rep_311_c_98 | Rep_311_c_98_75 | 76032 | 77231 | - | CE1 |
| CAZyme | Rep_311_c_98 | Rep_311_c_98_76 | 77245 | 78126 | - | CE1 |
| CAZyme | Rep_311_c_98 | Rep_311_c_98_77 | 78199 | 79872 | - | CE1 |
| TC | Rep_311_c_98 | Rep_311_c_98_78 | 79915 | 81531 | - | 8.A.46.1.6 |
| TC | Rep_311_c_98 | Rep_311_c_98_79 | 81543 | 84638 | - | 1.B.14.6.1 |
| peptidase | Rep_311_c_98 | Rep_311_c_98_80 | 84706 | 86364 | - | S09.UPW |
| TF | Rep_311_c_98 | Rep_311_c_98_81 | 86602 | 90621 | + | HTH_AraC |
| CAZyme | Rep_311_c_98 | Rep_311_c_98_82 | 90735 | 92639 | - | GH97 |
Gene ID: Rep_311_c_98_68
Type: CAZyme
Location: 66761 - 67921 (+)
Type: CAZyme
Location: 66761 - 67921 (+)
Gene ID: Rep_311_c_98_69
Type: CAZyme
Location: 68037 - 68831 (+)
Type: CAZyme
Location: 68037 - 68831 (+)
Gene ID: Rep_311_c_98_70
Type: pfam
Location: 69085 - 70176 (+)
Type: pfam
Location: 69085 - 70176 (+)
Gene ID: Rep_311_c_98_71
Type: TC
Location: 70217 - 71440 (+)
Type: TC
Location: 70217 - 71440 (+)
Gene ID: Rep_311_c_98_72
Type: pfam
Location: 71448 - 72605 (+)
Type: pfam
Location: 71448 - 72605 (+)
Gene ID: Rep_311_c_98_73
Type: pfam
Location: 72602 - 73585 (+)
Type: pfam
Location: 72602 - 73585 (+)
Gene ID: Rep_311_c_98_74
Type: CAZyme
Location: 73703 - 76030 (-)
Type: CAZyme
Location: 73703 - 76030 (-)
Gene ID: Rep_311_c_98_75
Type: CAZyme
Location: 76032 - 77231 (-)
Type: CAZyme
Location: 76032 - 77231 (-)
Gene ID: Rep_311_c_98_76
Type: CAZyme
Location: 77245 - 78126 (-)
Type: CAZyme
Location: 77245 - 78126 (-)
Gene ID: Rep_311_c_98_77
Type: CAZyme
Location: 78199 - 79872 (-)
Type: CAZyme
Location: 78199 - 79872 (-)
Gene ID: Rep_311_c_98_78
Type: TC
Location: 79915 - 81531 (-)
Type: TC
Location: 79915 - 81531 (-)
Gene ID: Rep_311_c_98_79
Type: TC
Location: 81543 - 84638 (-)
Type: TC
Location: 81543 - 84638 (-)
Gene ID: Rep_311_c_98_80
Type: peptidase
Location: 84706 - 86364 (-)
Type: peptidase
Location: 84706 - 86364 (-)
Gene ID: Rep_311_c_98_81
Type: TF
Location: 86602 - 90621 (+)
Type: TF
Location: 86602 - 90621 (+)
Gene ID: Rep_311_c_98_82
Type: CAZyme
Location: 90735 - 92639 (-)
Type: CAZyme
Location: 90735 - 92639 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.