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Cluster: Rep_311_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_311_c_36 Rep_311_c_36_22 26165 29455 + 1.B.14.6.1
pfam Rep_311_c_36 Rep_311_c_36_23 29471 31579 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) Rep_311_c_36 Rep_311_c_36_24 31709 32521 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_311_c_36 Rep_311_c_36_25 32628 34229 + GH16_3
NULL(UNKNOWN) Rep_311_c_36 Rep_311_c_36_26 34429 36033 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_311_c_36 Rep_311_c_36_27 36098 38005 - 9.B.14.3.1
pfam Rep_311_c_36 Rep_311_c_36_28 38015 39637 - DHOR
peptidase Rep_311_c_36 Rep_311_c_36_29 39695 40855 - M75.UPW
TC Rep_311_c_36 Rep_311_c_36_30 40900 42243 - 1.B.3.3.1
Gene ID: Rep_311_c_36_22
Type: TC
Location: 26165 - 29455 (+)
Gene ID: Rep_311_c_36_23
Type: pfam
Location: 29471 - 31579 (+)
Gene ID: Rep_311_c_36_24
Type:
Location: 31709 - 32521 (+)
Gene ID: Rep_311_c_36_25
Type: CAZyme
Location: 32628 - 34229 (+)
Gene ID: Rep_311_c_36_26
Type:
Location: 34429 - 36033 (+)
Gene ID: Rep_311_c_36_27
Type: TC
Location: 36098 - 38005 (-)
Gene ID: Rep_311_c_36_28
Type: pfam
Location: 38015 - 39637 (-)
Gene ID: Rep_311_c_36_29
Type: peptidase
Location: 39695 - 40855 (-)
Gene ID: Rep_311_c_36_30
Type: TC
Location: 40900 - 42243 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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