Cluster: Rep_311_CGC24
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_311
- CGC Family ID: CGCFAM_02949
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_311_c_51 | Rep_311_c_51_3 | 1880 | 3064 | - | 2.A.1.7.17 |
| CAZyme | Rep_311_c_51 | Rep_311_c_51_4 | 3085 | 4980 | - | GH32 |
| TF | Rep_311_c_51 | Rep_311_c_51_5 | 5128 | 7866 | + | HTH_AraC |
| TC | Rep_311_c_51 | Rep_311_c_51_6 | 7989 | 11081 | + | 1.B.14.6.1 |
| pfam | Rep_311_c_51 | Rep_311_c_51_7 | 11094 | 12824 | + | SusD_RagB | SusD-like_3 |
| pfam | Rep_311_c_51 | Rep_311_c_51_8 | 12834 | 14204 | + | DUF4960 |
| CAZyme | Rep_311_c_51 | Rep_311_c_51_9 | 14228 | 15757 | + | GH32 |
| NULL(UNKNOWN) | Rep_311_c_51 | Rep_311_c_51_10 | 15817 | 16749 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_311_c_51 | Rep_311_c_51_11 | 16853 | 17365 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_311_c_51 | Rep_311_c_51_12 | 17407 | 18363 | + | 8.A.5.1.6 |
| pfam | Rep_311_c_51 | Rep_311_c_51_13 | 18385 | 18897 | - | SPASM |
| pfam | Rep_311_c_51 | Rep_311_c_51_14 | 18952 | 19455 | - | Radical_SAM | Fer4_12 |
| CAZyme | Rep_311_c_51 | Rep_311_c_51_15 | 19505 | 22096 | - | GH115 |
Gene ID: Rep_311_c_51_3
Type: TC
Location: 1880 - 3064 (-)
Type: TC
Location: 1880 - 3064 (-)
Gene ID: Rep_311_c_51_4
Type: CAZyme
Location: 3085 - 4980 (-)
Type: CAZyme
Location: 3085 - 4980 (-)
Gene ID: Rep_311_c_51_5
Type: TF
Location: 5128 - 7866 (+)
Type: TF
Location: 5128 - 7866 (+)
Gene ID: Rep_311_c_51_6
Type: TC
Location: 7989 - 11081 (+)
Type: TC
Location: 7989 - 11081 (+)
Gene ID: Rep_311_c_51_7
Type: pfam
Location: 11094 - 12824 (+)
Type: pfam
Location: 11094 - 12824 (+)
Gene ID: Rep_311_c_51_8
Type: pfam
Location: 12834 - 14204 (+)
Type: pfam
Location: 12834 - 14204 (+)
Gene ID: Rep_311_c_51_9
Type: CAZyme
Location: 14228 - 15757 (+)
Type: CAZyme
Location: 14228 - 15757 (+)
Gene ID: Rep_311_c_51_10
Type:
Location: 15817 - 16749 (+)
Type:
Location: 15817 - 16749 (+)
Gene ID: Rep_311_c_51_11
Type:
Location: 16853 - 17365 (-)
Type:
Location: 16853 - 17365 (-)
Gene ID: Rep_311_c_51_12
Type: TC
Location: 17407 - 18363 (+)
Type: TC
Location: 17407 - 18363 (+)
Gene ID: Rep_311_c_51_13
Type: pfam
Location: 18385 - 18897 (-)
Type: pfam
Location: 18385 - 18897 (-)
Gene ID: Rep_311_c_51_14
Type: pfam
Location: 18952 - 19455 (-)
Type: pfam
Location: 18952 - 19455 (-)
Gene ID: Rep_311_c_51_15
Type: CAZyme
Location: 19505 - 22096 (-)
Type: CAZyme
Location: 19505 - 22096 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.