Cluster: Rep_311_CGC10
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_311
- CGC Family ID: CGCFAM_00574
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_311_c_11 | Rep_311_c_11_27 | 36365 | 38842 | - | GH2 |
| CAZyme | Rep_311_c_11 | Rep_311_c_11_28 | 38925 | 41807 | - | GH31_4 |
| TF | Rep_311_c_11 | Rep_311_c_11_29 | 42053 | 46111 | - | HTH_AraC | HTH_AraC |
| TC | Rep_311_c_11 | Rep_311_c_11_30 | 46488 | 49655 | + | 1.B.14.6.1 |
| TC | Rep_311_c_11 | Rep_311_c_11_31 | 49733 | 51400 | + | 8.A.46.1.2 |
| NULL(UNKNOWN) | Rep_311_c_11 | Rep_311_c_11_32 | 51513 | 53252 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_311_c_11 | Rep_311_c_11_33 | 53266 | 55392 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_311_c_11 | Rep_311_c_11_34 | 55418 | 57181 | + | GH5_4 |
| pfam | Rep_311_c_11 | Rep_311_c_11_35 | 57322 | 58803 | + | FGGY_N | FGGY_C |
| pfam | Rep_311_c_11 | Rep_311_c_11_36 | 58825 | 60144 | + | AP_endonuc_2 |
| TC | Rep_311_c_11 | Rep_311_c_11_37 | 60254 | 61726 | + | 2.A.1.1.3 |
| TF | Rep_311_c_11 | Rep_311_c_11_38 | 61862 | 62836 | + | GerE |
| NULL(UNKNOWN) | Rep_311_c_11 | Rep_311_c_11_39 | 63014 | 64321 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_311_c_11 | Rep_311_c_11_40 | 64455 | 65186 | + | 9.B.20.1.4 |
| pfam | Rep_311_c_11 | Rep_311_c_11_41 | 65251 | 67530 | - | PHO4 |
| NULL(UNKNOWN) | Rep_311_c_11 | Rep_311_c_11_42 | 67712 | 68539 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_311_c_11 | Rep_311_c_11_43 | 68654 | 70096 | + | 2.A.66.2.23 |
| TC | Rep_311_c_11 | Rep_311_c_11_44 | 70181 | 71020 | - | 8.A.5.1.4 |
Gene ID: Rep_311_c_11_27
Type: CAZyme
Location: 36365 - 38842 (-)
Type: CAZyme
Location: 36365 - 38842 (-)
Gene ID: Rep_311_c_11_28
Type: CAZyme
Location: 38925 - 41807 (-)
Type: CAZyme
Location: 38925 - 41807 (-)
Gene ID: Rep_311_c_11_29
Type: TF
Location: 42053 - 46111 (-)
Type: TF
Location: 42053 - 46111 (-)
Gene ID: Rep_311_c_11_30
Type: TC
Location: 46488 - 49655 (+)
Type: TC
Location: 46488 - 49655 (+)
Gene ID: Rep_311_c_11_31
Type: TC
Location: 49733 - 51400 (+)
Type: TC
Location: 49733 - 51400 (+)
Gene ID: Rep_311_c_11_32
Type:
Location: 51513 - 53252 (+)
Type:
Location: 51513 - 53252 (+)
Gene ID: Rep_311_c_11_33
Type:
Location: 53266 - 55392 (+)
Type:
Location: 53266 - 55392 (+)
Gene ID: Rep_311_c_11_34
Type: CAZyme
Location: 55418 - 57181 (+)
Type: CAZyme
Location: 55418 - 57181 (+)
Gene ID: Rep_311_c_11_35
Type: pfam
Location: 57322 - 58803 (+)
Type: pfam
Location: 57322 - 58803 (+)
Gene ID: Rep_311_c_11_36
Type: pfam
Location: 58825 - 60144 (+)
Type: pfam
Location: 58825 - 60144 (+)
Gene ID: Rep_311_c_11_37
Type: TC
Location: 60254 - 61726 (+)
Type: TC
Location: 60254 - 61726 (+)
Gene ID: Rep_311_c_11_38
Type: TF
Location: 61862 - 62836 (+)
Type: TF
Location: 61862 - 62836 (+)
Gene ID: Rep_311_c_11_39
Type:
Location: 63014 - 64321 (+)
Type:
Location: 63014 - 64321 (+)
Gene ID: Rep_311_c_11_40
Type: TC
Location: 64455 - 65186 (+)
Type: TC
Location: 64455 - 65186 (+)
Gene ID: Rep_311_c_11_41
Type: pfam
Location: 65251 - 67530 (-)
Type: pfam
Location: 65251 - 67530 (-)
Gene ID: Rep_311_c_11_42
Type:
Location: 67712 - 68539 (+)
Type:
Location: 67712 - 68539 (+)
Gene ID: Rep_311_c_11_43
Type: TC
Location: 68654 - 70096 (+)
Type: TC
Location: 68654 - 70096 (+)
Gene ID: Rep_311_c_11_44
Type: TC
Location: 70181 - 71020 (-)
Type: TC
Location: 70181 - 71020 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.