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Cluster: Rep_311_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_311_c_33 Rep_311_c_33_9 13829 15289 + GH30_2
NULL(UNKNOWN) Rep_311_c_33 Rep_311_c_33_10 15312 16340 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_311_c_33 Rep_311_c_33_11 16425 19442 - GH97
CAZyme Rep_311_c_33 Rep_311_c_33_12 19449 21656 - GH36
NULL(UNKNOWN) Rep_311_c_33 Rep_311_c_33_13 21667 22191 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_311_c_33 Rep_311_c_33_14 22278 24746 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_311_c_33 Rep_311_c_33_15 24774 26351 - GH30
pfam Rep_311_c_33 Rep_311_c_33_16 26362 28068 - SusD_RagB | SusD-like_3
TC Rep_311_c_33 Rep_311_c_33_17 28075 31446 - 1.B.14.6.1
Gene ID: Rep_311_c_33_9
Type: CAZyme
Location: 13829 - 15289 (+)
Gene ID: Rep_311_c_33_10
Type:
Location: 15312 - 16340 (+)
Gene ID: Rep_311_c_33_11
Type: CAZyme
Location: 16425 - 19442 (-)
Gene ID: Rep_311_c_33_12
Type: CAZyme
Location: 19449 - 21656 (-)
Gene ID: Rep_311_c_33_13
Type:
Location: 21667 - 22191 (-)
Gene ID: Rep_311_c_33_14
Type:
Location: 22278 - 24746 (-)
Gene ID: Rep_311_c_33_15
Type: CAZyme
Location: 24774 - 26351 (-)
Gene ID: Rep_311_c_33_16
Type: pfam
Location: 26362 - 28068 (-)
Gene ID: Rep_311_c_33_17
Type: TC
Location: 28075 - 31446 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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