PROTEIN: Rep_311_c_33_10
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Protein File & Metadata
Source:
Rep_311_c_33_10.pdb
Genome ID:
Protein ID:
Rep_311_c_33_10
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Protein Sequence
MNCFKSMFLA LAFAAGTTAS AAVIPTPDGE YISVDEAQCD ICSVKAGVIE NTRADASFTF 60 ALTNETEQPY ELSFQASLNK REPAVLSLTV SKGDETLYEG TVEPLNTGSW TSFLGYKYYL 120 GILPAGELTM TMKVVSVADS YAGNFRNFAI RATNEKHAIT IPTAEGQFFN LADAYLGGSA 180 TLTPPVIDFT ARGSSIKFVI DNTAESPYSL EFRASLNGGD AVSSLVKFSL SGNGYEDAKE 240 VTINGTEAWT RYNTYSCNFA NLPVGEYNLV MTILELNNCV YAGNFRDFKM TQSEPTSIDS 300 FRTDSLDNTV EYYDVNGIRL QSEPASGFFI MKKGTKFTKI VK 342
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4Q0IKD3 | CE8 | 1 | 300 | 1 | 396 | 0.4237 |
0.7373 |
| UJF31724.1 | CBM6 , CE8 | 14 | 296 | 34 | 304 | 0.4033 |
0.7531 |
| AF-A0A1B1SCV7-F1-model_v4 | CE8 | 1 | 299 | 10 | 396 | 0.3848 |
0.6668 |
| AF-A0A3G6ULY7-F1-model_v4 | CBM4 , CBM6 , GH16_3 | 23 | 295 | 555 | 855 | 0.3326 |
0.5798 |
| A0A7M2X240 | CBM6 | 16 | 297 | 629 | 1023 | 0.3182 |
0.6136 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4Q0IKD3 | CE8 | 1 | 300 | 1 | 396 | 0.4237 |
0.7373 |
| UJF31724.1 | CBM6 , CE8 | 14 | 296 | 34 | 304 | 0.4033 |
0.7531 |
| A0A7M2X240 | CBM6 | 16 | 297 | 629 | 1023 | 0.3182 |
0.6136 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P33558-F1-model_v4 | 10 | 298 | 144 | 512 | 0.5205 |
0.7353 |