dbCAN Logo

Genome Details

Selected Rep_genome_ID: Rep_3065
Total Genomes Found: 29
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Faecalibacterium
→
Species
Faecalibacterium longum
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A58.CMAG_1 2,952,575 99.32% 0% China(Inner Mongolia) Asia IMGG
BF194_maxbin.001_sub 2,980,897 100% 0% NA Africa H3AfricaPhase2
CGMR056809 2,309,200 99.32% 0% China Asia CGMR
Rep_3065 2,938,873 100% 0% NA NA WIS
Rep_3066 5,544,941 94.7357% 4.42177% NA NA WIS
SPMP03_bin.63 2,337,218 94.57% 1.38% Singapore Asia SPMP
SPMP106_bin.86 2,213,295 99.09% 2.04% Singapore Asia SPMP
SPMP107_bin.23 2,274,933 92.81% 3.06% Singapore Asia SPMP
SPMP109_bin.9 2,213,129 98.41% 0% Singapore Asia SPMP
SPMP22_bin.39 2,141,903 95.24% 0.68% Singapore Asia SPMP
SPMP31_bin.21 2,078,627 95.08% 0% Singapore Asia SPMP
SPMP33_bin.28 2,195,058 94.33% 0% Singapore Asia SPMP
SPMP35_bin.40 2,124,003 93.3% 1.67% Singapore Asia SPMP
SPMP42_bin.18 2,101,241 91.19% 2.04% Singapore Asia SPMP
SPMP45_bin.131 2,348,917 98.28% 0% Singapore Asia SPMP
SPMP46_bin.14 2,198,481 96.6% 1.36% Singapore Asia SPMP
SPMP50_bin.4 2,480,047 97.96% 0.68% Singapore Asia SPMP
SPMP56_bin.40 2,324,483 95.69% 0% Singapore Asia SPMP
SPMP63_bin.69 2,370,567 96.41% 1.62% Singapore Asia SPMP
SPMP66_bin.91 2,106,954 90.19% 0% Singapore Asia SPMP
SPMP69_bin.73 2,000,659 91.7% 3.4% Singapore Asia SPMP
SPMP72_bin.11 2,010,853 96.41% 0% Singapore Asia SPMP
SPMP76_bin.85 2,196,642 96.01% 1.7% Singapore Asia SPMP
SPMP77_bin.36 2,270,737 96.43% 0% Singapore Asia SPMP
SPMP82_bin.88 2,237,308 95.01% 0.68% Singapore Asia SPMP
SPMP84_bin.47 2,440,688 95.24% 2.04% Singapore Asia SPMP
SPMP89_bin.89 2,410,614 95.92% 1.81% Singapore Asia SPMP
SPMP94_bin.77 2,241,339 92.71% 0% Singapore Asia SPMP
SPMP97_bin.11 2,183,517 92.89% 1.7% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_3065_CGC20 CGCFAM_00041 Yes 9 2
Rep_3065_CGC19 CGCFAM_00075 Yes 6 1
Rep_3065_CGC16 CGCFAM_00091 Yes 8 3
Rep_3065_CGC12 CGCFAM_00507 Yes 4 2
Rep_3065_CGC24 CGCFAM_01321 Yes 9 1
Rep_3065_CGC17 CGCFAM_03136 Yes 5 1
Rep_3065_CGC5 CGCFAM_08301 Yes 7 4
Top CAZyme Families