Cluster: Rep_3065_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3065
- CGC Family ID: CGCFAM_00507
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3065_c_0 | Rep_3065_c_0_1052 | 1131044 | 1132669 | + | 3.A.1.106.10 |
| pfam | Rep_3065_c_0 | Rep_3065_c_0_1053 | 1132920 | 1133471 | - | GtrA_DPMS_TM |
| CAZyme | Rep_3065_c_0 | Rep_3065_c_0_1054 | 1133485 | 1135908 | - | GH3 |
| CAZyme | Rep_3065_c_0 | Rep_3065_c_0_1055 | 1136012 | 1138960 | - | GH3 |
Gene ID: Rep_3065_c_0_1052
Type: TC
Location: 1131044 - 1132669 (+)
Type: TC
Location: 1131044 - 1132669 (+)
Gene ID: Rep_3065_c_0_1053
Type: pfam
Location: 1132920 - 1133471 (-)
Type: pfam
Location: 1132920 - 1133471 (-)
Gene ID: Rep_3065_c_0_1054
Type: CAZyme
Location: 1133485 - 1135908 (-)
Type: CAZyme
Location: 1133485 - 1135908 (-)
Gene ID: Rep_3065_c_0_1055
Type: CAZyme
Location: 1136012 - 1138960 (-)
Type: CAZyme
Location: 1136012 - 1138960 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium longum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.