Cluster: Rep_3065_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3065
- CGC Family ID: CGCFAM_03136
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3065_c_0 | Rep_3065_c_0_1464 | 1557652 | 1558710 | - | 9.A.23.1.1 |
| CAZyme | Rep_3065_c_0 | Rep_3065_c_0_1465 | 1559053 | 1560546 | + | GH25 |
| pfam | Rep_3065_c_0 | Rep_3065_c_0_1466 | 1560557 | 1561390 | + | Hydrolase | S6PP | Hydrolase_3 |
| TC | Rep_3065_c_0 | Rep_3065_c_0_1467 | 1561429 | 1561995 | - | 2.A.51.1.6 |
| TC | Rep_3065_c_0 | Rep_3065_c_0_1468 | 1561997 | 1562587 | - | 2.A.51.1.6 |
Gene ID: Rep_3065_c_0_1464
Type: TC
Location: 1557652 - 1558710 (-)
Type: TC
Location: 1557652 - 1558710 (-)
Gene ID: Rep_3065_c_0_1465
Type: CAZyme
Location: 1559053 - 1560546 (+)
Type: CAZyme
Location: 1559053 - 1560546 (+)
Gene ID: Rep_3065_c_0_1466
Type: pfam
Location: 1560557 - 1561390 (+)
Type: pfam
Location: 1560557 - 1561390 (+)
Gene ID: Rep_3065_c_0_1467
Type: TC
Location: 1561429 - 1561995 (-)
Type: TC
Location: 1561429 - 1561995 (-)
Gene ID: Rep_3065_c_0_1468
Type: TC
Location: 1561997 - 1562587 (-)
Type: TC
Location: 1561997 - 1562587 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium longum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.