Genome Details
Selected Rep_genome_ID: Rep_2927
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902470925
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_2927 | 2,411,406 | 98.9919% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_2927_CGC4 | CGCFAM_00012 | Yes | 5 | 1 | host glycan/beta-glucan |
| Rep_2927_CGC8 | CGCFAM_00020 | Yes | 6 | 1 | host glycan/beta-glucan |
| Rep_2927_CGC7 | CGCFAM_00154 | Yes | 4 | 1 | |
| Rep_2927_CGC13 | CGCFAM_00243 | Yes | 10 | 3 | host glycan |
| Rep_2927_CGC23 | CGCFAM_00282 | Yes | 3 | 1 | |
| Rep_2927_CGC2 | CGCFAM_00309 | Yes | 4 | 1 | |
| Rep_2927_CGC14 | CGCFAM_00464 | Yes | 5 | 3 | |
| Rep_2927_CGC21 | CGCFAM_00672 | Yes | 11 | 4 | |
| Rep_2927_CGC18 | CGCFAM_00935 | Yes | 7 | 1 | |
| Rep_2927_CGC25 | CGCFAM_03827 | Yes | 4 | 1 | |
| Rep_2927_CGC24 | CGCFAM_06960 | Yes | 4 | 1 | |
| Rep_2927_CGC6 | CGCFAM_09143 | Yes | 13 | 1 | |
| Rep_2927_CGC11 | CGCFAM_09245 | Yes | 9 | 1 |
Top CAZyme Families