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Cluster: Rep_2927_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2927_c_49 Rep_2927_c_49_2 1677 2705 - GT4
NULL(UNKNOWN) Rep_2927_c_49 Rep_2927_c_49_3 2803 2901 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2927_c_49 Rep_2927_c_49_4 2942 3628 + GT2
pfam Rep_2927_c_49 Rep_2927_c_49_5 3631 3996 + DUF2304
CAZyme Rep_2927_c_49 Rep_2927_c_49_6 3993 5147 + GT4
pfam Rep_2927_c_49 Rep_2927_c_49_7 5234 6277 + Acyl_transf_3
NULL(UNKNOWN) Rep_2927_c_49 Rep_2927_c_49_8 6285 7544 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2927_c_49 Rep_2927_c_49_9 7535 8662 - GT4
pfam Rep_2927_c_49 Rep_2927_c_49_10 8730 9575 - LicD
pfam Rep_2927_c_49 Rep_2927_c_49_11 9668 10990 - AAA_14 | DUF4143
TC Rep_2927_c_49 Rep_2927_c_49_12 11129 12070 - 2.A.7.18.1
Gene ID: Rep_2927_c_49_2
Type: CAZyme
Location: 1677 - 2705 (-)
Gene ID: Rep_2927_c_49_3
Type:
Location: 2803 - 2901 (+)
Gene ID: Rep_2927_c_49_4
Type: CAZyme
Location: 2942 - 3628 (+)
Gene ID: Rep_2927_c_49_5
Type: pfam
Location: 3631 - 3996 (+)
Gene ID: Rep_2927_c_49_6
Type: CAZyme
Location: 3993 - 5147 (+)
Gene ID: Rep_2927_c_49_7
Type: pfam
Location: 5234 - 6277 (+)
Gene ID: Rep_2927_c_49_8
Type:
Location: 6285 - 7544 (+)
Gene ID: Rep_2927_c_49_9
Type: CAZyme
Location: 7535 - 8662 (-)
Gene ID: Rep_2927_c_49_10
Type: pfam
Location: 8730 - 9575 (-)
Gene ID: Rep_2927_c_49_11
Type: pfam
Location: 9668 - 10990 (-)
Gene ID: Rep_2927_c_49_12
Type: TC
Location: 11129 - 12070 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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