Cluster: Rep_2927_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2927
- CGC Family ID: CGCFAM_00464
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2927_c_24 | Rep_2927_c_24_5 | 3635 | 4879 | - | GH105 |
| CAZyme | Rep_2927_c_24 | Rep_2927_c_24_6 | 4995 | 7964 | - | CE19 | CE8 |
| peptidase | Rep_2927_c_24 | Rep_2927_c_24_7 | 7961 | 8917 | - | S09.UPW |
| TC | Rep_2927_c_24 | Rep_2927_c_24_8 | 9101 | 10660 | - | 2.A.2.5.1 |
| CAZyme | Rep_2927_c_24 | Rep_2927_c_24_9 | 10961 | 12535 | - | GH28 |
Gene ID: Rep_2927_c_24_5
Type: CAZyme
Location: 3635 - 4879 (-)
Type: CAZyme
Location: 3635 - 4879 (-)
Gene ID: Rep_2927_c_24_6
Type: CAZyme
Location: 4995 - 7964 (-)
Type: CAZyme
Location: 4995 - 7964 (-)
Gene ID: Rep_2927_c_24_7
Type: peptidase
Location: 7961 - 8917 (-)
Type: peptidase
Location: 7961 - 8917 (-)
Gene ID: Rep_2927_c_24_8
Type: TC
Location: 9101 - 10660 (-)
Type: TC
Location: 9101 - 10660 (-)
Gene ID: Rep_2927_c_24_9
Type: CAZyme
Location: 10961 - 12535 (-)
Type: CAZyme
Location: 10961 - 12535 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902470925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.