Genome Details
Selected Rep_genome_ID: Rep_207
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900544495
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0276 | 2,988,965 | 97.01% | 0% | Luxembourg | Europe | HRGM |
| MGYG000001933 | 2,797,127 | 95.78% | 0% | Denmark | Europe | UHGG |
| Rep_207 | 3,442,286 | 98.5185% | 0.0925926% | NA | NA | WIS |
| SW091_bin.24 | 2,923,852 | 91.98% | 0.37% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_207_CGC9 | CGCFAM_00023 | Yes | 3 | 1 | |
| Rep_207_CGC10 | CGCFAM_00031 | Yes | 13 | 4 | pectin/galactan |
| Rep_207_CGC41 | CGCFAM_00034 | Yes | 9 | 4 | |
| Rep_207_CGC17 | CGCFAM_00043 | Yes | 7 | 3 | alpha-glucan |
| Rep_207_CGC23 | CGCFAM_00095 | Yes | 7 | 3 | |
| Rep_207_CGC19 | CGCFAM_00148 | Yes | 4 | 1 | |
| Rep_207_CGC25 | CGCFAM_00192 | Yes | 5 | 2 | |
| Rep_207_CGC38 | CGCFAM_00431 | Yes | 8 | 1 | |
| Rep_207_CGC14 | CGCFAM_00512 | Yes | 4 | 1 | |
| Rep_207_CGC37 | CGCFAM_00521 | Yes | 11 | 2 | |
| Rep_207_CGC11 | CGCFAM_00543 | Yes | 5 | 2 | |
| Rep_207_CGC33 | CGCFAM_00604 | Yes | 16 | 1 | |
| Rep_207_CGC30 | CGCFAM_01162 | Yes | 6 | 1 | |
| Rep_207_CGC13 | CGCFAM_01356 | Yes | 9 | 4 | |
| Rep_207_CGC18 | CGCFAM_01872 | Yes | 7 | 3 | |
| Rep_207_CGC43 | CGCFAM_02015 | Yes | 16 | 2 | |
| Rep_207_CGC22 | CGCFAM_02523 | Yes | 6 | 1 | |
| Rep_207_CGC8 | CGCFAM_02623 | Yes | 4 | 1 | |
| Rep_207_CGC2 | CGCFAM_03251 | Yes | 4 | 1 | |
| Rep_207_CGC40 | CGCFAM_03585 | Yes | 13 | 4 | |
| Rep_207_CGC36 | CGCFAM_03948 | Yes | 5 | 1 | |
| Rep_207_CGC21 | CGCFAM_05472 | Yes | 6 | 1 | |
| Rep_207_CGC26 | CGCFAM_05579 | Yes | 6 | 2 | |
| Rep_207_CGC24 | CGCFAM_06936 | Yes | 5 | 2 | |
| Rep_207_CGC34 | CGCFAM_07161 | Yes | 4 | 1 |
Top CAZyme Families