dbCAN Logo

Cluster: Rep_207_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_207_c_0 Rep_207_c_0_2699 3133308 3134660 - 3.A.5.1.1
NULL(UNKNOWN) Rep_207_c_0 Rep_207_c_0_2700 3134720 3134962 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_207_c_0 Rep_207_c_0_2701 3134845 3136890 - 2.A.16.2.2
pfam Rep_207_c_0 Rep_207_c_0_2702 3137047 3138771 - DHH | DHHA1 | RecJ_OB
CAZyme Rep_207_c_0 Rep_207_c_0_2703 3139285 3140487 + GH33
pfam Rep_207_c_0 Rep_207_c_0_2704 3140568 3142199 - Cpn60_TCP1
pfam Rep_207_c_0 Rep_207_c_0_2705 3142284 3142556 - Cpn10
TC Rep_207_c_0 Rep_207_c_0_2706 3143174 3144817 - 1.B.9.4.2
Gene ID: Rep_207_c_0_2699
Type: TC
Location: 3133308 - 3134660 (-)
Gene ID: Rep_207_c_0_2700
Type:
Location: 3134720 - 3134962 (+)
Gene ID: Rep_207_c_0_2701
Type: TC
Location: 3134845 - 3136890 (-)
Gene ID: Rep_207_c_0_2702
Type: pfam
Location: 3137047 - 3138771 (-)
Gene ID: Rep_207_c_0_2703
Type: CAZyme
Location: 3139285 - 3140487 (+)
Gene ID: Rep_207_c_0_2704
Type: pfam
Location: 3140568 - 3142199 (-)
Gene ID: Rep_207_c_0_2705
Type: pfam
Location: 3142284 - 3142556 (-)
Gene ID: Rep_207_c_0_2706
Type: TC
Location: 3143174 - 3144817 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List