Cluster: Rep_207_CGC40
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_207
- CGC Family ID: CGCFAM_03585
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_207_c_0 | Rep_207_c_0_2768 | 3223617 | 3225674 | + | 3.A.7.7.1 |
| pfam | Rep_207_c_0 | Rep_207_c_0_2769 | 3225844 | 3226521 | - | Ala_racemase_N |
| pfam | Rep_207_c_0 | Rep_207_c_0_2770 | 3226568 | 3227059 | - | DUF4494 |
| CAZyme | Rep_207_c_0 | Rep_207_c_0_2771 | 3227254 | 3229266 | + | GH20 |
| pfam | Rep_207_c_0 | Rep_207_c_0_2772 | 3229332 | 3230102 | + | Pro_isomerase |
| NULL(UNKNOWN) | Rep_207_c_0 | Rep_207_c_0_2773 | 3231325 | 3232428 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_207_c_0 | Rep_207_c_0_2774 | 3232820 | 3235270 | + | 1.B.14.6.2 |
| NULL(UNKNOWN) | Rep_207_c_0 | Rep_207_c_0_2775 | 3235246 | 3236265 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_207_c_0 | Rep_207_c_0_2776 | 3236308 | 3238059 | + | 8.A.46.2.1 |
| CAZyme | Rep_207_c_0 | Rep_207_c_0_2777 | 3238148 | 3239533 | + | GH29 |
| CAZyme | Rep_207_c_0 | Rep_207_c_0_2778 | 3239709 | 3241058 | + | GH29 |
| pfam | Rep_207_c_0 | Rep_207_c_0_2779 | 3241245 | 3242513 | + | N-glycanase_N | N-glycanase_C |
| CAZyme | Rep_207_c_0 | Rep_207_c_0_2780 | 3242589 | 3243647 | - | CBM9 |
Gene ID: Rep_207_c_0_2768
Type: TC
Location: 3223617 - 3225674 (+)
Type: TC
Location: 3223617 - 3225674 (+)
Gene ID: Rep_207_c_0_2769
Type: pfam
Location: 3225844 - 3226521 (-)
Type: pfam
Location: 3225844 - 3226521 (-)
Gene ID: Rep_207_c_0_2770
Type: pfam
Location: 3226568 - 3227059 (-)
Type: pfam
Location: 3226568 - 3227059 (-)
Gene ID: Rep_207_c_0_2771
Type: CAZyme
Location: 3227254 - 3229266 (+)
Type: CAZyme
Location: 3227254 - 3229266 (+)
Gene ID: Rep_207_c_0_2772
Type: pfam
Location: 3229332 - 3230102 (+)
Type: pfam
Location: 3229332 - 3230102 (+)
Gene ID: Rep_207_c_0_2773
Type:
Location: 3231325 - 3232428 (-)
Type:
Location: 3231325 - 3232428 (-)
Gene ID: Rep_207_c_0_2774
Type: TC
Location: 3232820 - 3235270 (+)
Type: TC
Location: 3232820 - 3235270 (+)
Gene ID: Rep_207_c_0_2775
Type:
Location: 3235246 - 3236265 (+)
Type:
Location: 3235246 - 3236265 (+)
Gene ID: Rep_207_c_0_2776
Type: TC
Location: 3236308 - 3238059 (+)
Type: TC
Location: 3236308 - 3238059 (+)
Gene ID: Rep_207_c_0_2777
Type: CAZyme
Location: 3238148 - 3239533 (+)
Type: CAZyme
Location: 3238148 - 3239533 (+)
Gene ID: Rep_207_c_0_2778
Type: CAZyme
Location: 3239709 - 3241058 (+)
Type: CAZyme
Location: 3239709 - 3241058 (+)
Gene ID: Rep_207_c_0_2779
Type: pfam
Location: 3241245 - 3242513 (+)
Type: pfam
Location: 3241245 - 3242513 (+)
Gene ID: Rep_207_c_0_2780
Type: CAZyme
Location: 3242589 - 3243647 (-)
Type: CAZyme
Location: 3242589 - 3243647 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900544495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.