Cluster: Rep_207_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_207
- CGC Family ID: CGCFAM_02523
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_207_c_0 | Rep_207_c_0_1249 | 1534598 | 1536595 | + | 2.A.67.4.2 |
| TC | Rep_207_c_0 | Rep_207_c_0_1250 | 1536608 | 1537135 | + | 8.A.5.1.6 |
| TC | Rep_207_c_0 | Rep_207_c_0_1251 | 1537217 | 1537567 | + | 8.A.5.1.3 |
| CAZyme | Rep_207_c_0 | Rep_207_c_0_1252 | 1538094 | 1540421 | - | GH20 |
| TF | Rep_207_c_0 | Rep_207_c_0_1253 | 1540489 | 1540830 | - | HTH_3 |
| TC | Rep_207_c_0 | Rep_207_c_0_1254 | 1540988 | 1542208 | - | 2.A.1.35.1 |
Gene ID: Rep_207_c_0_1249
Type: TC
Location: 1534598 - 1536595 (+)
Type: TC
Location: 1534598 - 1536595 (+)
Gene ID: Rep_207_c_0_1250
Type: TC
Location: 1536608 - 1537135 (+)
Type: TC
Location: 1536608 - 1537135 (+)
Gene ID: Rep_207_c_0_1251
Type: TC
Location: 1537217 - 1537567 (+)
Type: TC
Location: 1537217 - 1537567 (+)
Gene ID: Rep_207_c_0_1252
Type: CAZyme
Location: 1538094 - 1540421 (-)
Type: CAZyme
Location: 1538094 - 1540421 (-)
Gene ID: Rep_207_c_0_1253
Type: TF
Location: 1540489 - 1540830 (-)
Type: TF
Location: 1540489 - 1540830 (-)
Gene ID: Rep_207_c_0_1254
Type: TC
Location: 1540988 - 1542208 (-)
Type: TC
Location: 1540988 - 1542208 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900544495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_207_c_0_1250 | vegetarian > vegan | 1.77700 | 0.00141 |