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Cluster: Rep_207_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_207_c_0 Rep_207_c_0_956 1153699 1154271 - 2.A.51.1.6
pfam Rep_207_c_0 Rep_207_c_0_957 1154526 1155059 - Chromate_transp
CAZyme Rep_207_c_0 Rep_207_c_0_958 1155187 1156134 - CBM50
CAZyme Rep_207_c_0 Rep_207_c_0_959 1156967 1158145 + GT4
CAZyme Rep_207_c_0 Rep_207_c_0_960 1158206 1159153 + GT2
CAZyme Rep_207_c_0 Rep_207_c_0_961 1159195 1160385 + GT4
peptidase Rep_207_c_0 Rep_207_c_0_962 1160417 1162081 - C44.UNW
NULL(UNKNOWN) Rep_207_c_0 Rep_207_c_0_963 1162444 1162578 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_207_c_0 Rep_207_c_0_964 1162625 1163881 - 1.A.11.1.4
Gene ID: Rep_207_c_0_956
Type: TC
Location: 1153699 - 1154271 (-)
Gene ID: Rep_207_c_0_957
Type: pfam
Location: 1154526 - 1155059 (-)
Gene ID: Rep_207_c_0_958
Type: CAZyme
Location: 1155187 - 1156134 (-)
Gene ID: Rep_207_c_0_959
Type: CAZyme
Location: 1156967 - 1158145 (+)
Gene ID: Rep_207_c_0_960
Type: CAZyme
Location: 1158206 - 1159153 (+)
Gene ID: Rep_207_c_0_961
Type: CAZyme
Location: 1159195 - 1160385 (+)
Gene ID: Rep_207_c_0_962
Type: peptidase
Location: 1160417 - 1162081 (-)
Gene ID: Rep_207_c_0_963
Type:
Location: 1162444 - 1162578 (-)
Gene ID: Rep_207_c_0_964
Type: TC
Location: 1162625 - 1163881 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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