Cluster: Rep_207_CGC43
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_207
- CGC Family ID: CGCFAM_02015
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_207_c_0 | Rep_207_c_0_2852 | 3327701 | 3328342 | - | 2.A.115.2.14 |
| TC | Rep_207_c_0 | Rep_207_c_0_2853 | 3328373 | 3329737 | - | 2.A.66.1.32 |
| pfam | Rep_207_c_0 | Rep_207_c_0_2854 | 3330133 | 3331242 | - | Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_8 | DUF4369 |
| pfam | Rep_207_c_0 | Rep_207_c_0_2855 | 3331811 | 3332983 | - | BT_3987-like_N | Laminin_G_3 |
| CAZyme | Rep_207_c_0 | Rep_207_c_0_2856 | 3333026 | 3334147 | - | GH18 |
| TC | Rep_207_c_0 | Rep_207_c_0_2857 | 3334200 | 3335807 | - | 8.A.46.2.1 |
| TC | Rep_207_c_0 | Rep_207_c_0_2858 | 3335852 | 3339151 | - | 1.B.14.6.13 |
| STP | Rep_207_c_0 | Rep_207_c_0_2859 | 3339466 | 3340560 | - | FecR |
| TF | Rep_207_c_0 | Rep_207_c_0_2860 | 3340687 | 3341277 | - | GerE |
| TC | Rep_207_c_0 | Rep_207_c_0_2861 | 3341317 | 3342420 | - | 3.A.1.132.3 |
| pfam | Rep_207_c_0 | Rep_207_c_0_2862 | 3342577 | 3343347 | - | Methyltransf_4 | Methyltransf_25 | Methyltransf_31 |
| pfam | Rep_207_c_0 | Rep_207_c_0_2863 | 3344015 | 3345031 | - | Aminotran_4 |
| CAZyme | Rep_207_c_0 | Rep_207_c_0_2864 | 3345402 | 3346742 | - | GH20 |
| pfam | Rep_207_c_0 | Rep_207_c_0_2865 | 3346782 | 3347921 | - | YhcG_C | DUF1016_N |
| pfam | Rep_207_c_0 | Rep_207_c_0_2866 | 3348081 | 3349061 | - | ROK |
| TC | Rep_207_c_0 | Rep_207_c_0_2867 | 3349192 | 3349902 | + | 2.A.76.1.6 |
Gene ID: Rep_207_c_0_2852
Type: TC
Location: 3327701 - 3328342 (-)
Type: TC
Location: 3327701 - 3328342 (-)
Gene ID: Rep_207_c_0_2853
Type: TC
Location: 3328373 - 3329737 (-)
Type: TC
Location: 3328373 - 3329737 (-)
Gene ID: Rep_207_c_0_2854
Type: pfam
Location: 3330133 - 3331242 (-)
Type: pfam
Location: 3330133 - 3331242 (-)
Gene ID: Rep_207_c_0_2855
Type: pfam
Location: 3331811 - 3332983 (-)
Type: pfam
Location: 3331811 - 3332983 (-)
Gene ID: Rep_207_c_0_2856
Type: CAZyme
Location: 3333026 - 3334147 (-)
Type: CAZyme
Location: 3333026 - 3334147 (-)
Gene ID: Rep_207_c_0_2857
Type: TC
Location: 3334200 - 3335807 (-)
Type: TC
Location: 3334200 - 3335807 (-)
Gene ID: Rep_207_c_0_2858
Type: TC
Location: 3335852 - 3339151 (-)
Type: TC
Location: 3335852 - 3339151 (-)
Gene ID: Rep_207_c_0_2859
Type: STP
Location: 3339466 - 3340560 (-)
Type: STP
Location: 3339466 - 3340560 (-)
Gene ID: Rep_207_c_0_2860
Type: TF
Location: 3340687 - 3341277 (-)
Type: TF
Location: 3340687 - 3341277 (-)
Gene ID: Rep_207_c_0_2861
Type: TC
Location: 3341317 - 3342420 (-)
Type: TC
Location: 3341317 - 3342420 (-)
Gene ID: Rep_207_c_0_2862
Type: pfam
Location: 3342577 - 3343347 (-)
Type: pfam
Location: 3342577 - 3343347 (-)
Gene ID: Rep_207_c_0_2863
Type: pfam
Location: 3344015 - 3345031 (-)
Type: pfam
Location: 3344015 - 3345031 (-)
Gene ID: Rep_207_c_0_2864
Type: CAZyme
Location: 3345402 - 3346742 (-)
Type: CAZyme
Location: 3345402 - 3346742 (-)
Gene ID: Rep_207_c_0_2865
Type: pfam
Location: 3346782 - 3347921 (-)
Type: pfam
Location: 3346782 - 3347921 (-)
Gene ID: Rep_207_c_0_2866
Type: pfam
Location: 3348081 - 3349061 (-)
Type: pfam
Location: 3348081 - 3349061 (-)
Gene ID: Rep_207_c_0_2867
Type: TC
Location: 3349192 - 3349902 (+)
Type: TC
Location: 3349192 - 3349902 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900544495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.