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Cluster: Rep_207_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_207_c_0 Rep_207_c_0_2795 3260070 3261971 - GH13_46
pfam Rep_207_c_0 Rep_207_c_0_2796 3262253 3262663 - Pullul_strch_C | pulA_all-beta
CAZyme Rep_207_c_0 Rep_207_c_0_2797 3262630 3264189 - GH13_14
CAZyme Rep_207_c_0 Rep_207_c_0_2798 3264213 3266333 - GH97
CAZyme Rep_207_c_0 Rep_207_c_0_2799 3266421 3269093 - GH77
TC Rep_207_c_0 Rep_207_c_0_2800 3269234 3270544 - 2.A.2.6.2
TF Rep_207_c_0 Rep_207_c_0_2801 3270604 3271611 - LacI
NULL(UNKNOWN) Rep_207_c_0 Rep_207_c_0_2802 3271741 3271839 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_207_c_0 Rep_207_c_0_2803 3271960 3275043 + 1.B.14.6.1
Gene ID: Rep_207_c_0_2795
Type: CAZyme
Location: 3260070 - 3261971 (-)
Gene ID: Rep_207_c_0_2796
Type: pfam
Location: 3262253 - 3262663 (-)
Gene ID: Rep_207_c_0_2797
Type: CAZyme
Location: 3262630 - 3264189 (-)
Gene ID: Rep_207_c_0_2798
Type: CAZyme
Location: 3264213 - 3266333 (-)
Gene ID: Rep_207_c_0_2799
Type: CAZyme
Location: 3266421 - 3269093 (-)
Gene ID: Rep_207_c_0_2800
Type: TC
Location: 3269234 - 3270544 (-)
Gene ID: Rep_207_c_0_2801
Type: TF
Location: 3270604 - 3271611 (-)
Gene ID: Rep_207_c_0_2802
Type:
Location: 3271741 - 3271839 (+)
Gene ID: Rep_207_c_0_2803
Type: TC
Location: 3271960 - 3275043 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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