Genome Details
Selected Rep_genome_ID: Rep_194
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella intestinigallinarum
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C124.bin_19 | 4,018,996 | 98.89% | 0.74% | China(Inner Mongolia) | Asia | IMGG |
| CGMR008133 | 3,211,188 | 93.83% | 1.05% | China | Asia | CGMR |
| GH128_24 | 3,692,111 | 98.89% | 0.93% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_0392 | 3,621,441 | 98.88% | 0.37% | Luxembourg | Europe | HRGM |
| MGYG000002558 | 3,471,678 | 97.39% | 0.09% | China | Asia | UHGG |
| Rep_194 | 3,957,557 | 98.8889% | 0.37037% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_194_CGC19 | CGCFAM_00001 | Yes | 5 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_194_CGC34 | CGCFAM_00001 | Yes | 3 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_194_CGC31 | CGCFAM_00005 | Yes | 20 | 11 | |
| Rep_194_CGC4 | CGCFAM_00030 | Yes | 8 | 3 | |
| Rep_194_CGC51 | CGCFAM_00034 | Yes | 12 | 6 | |
| Rep_194_CGC36 | CGCFAM_00059 | Yes | 6 | 1 | |
| Rep_194_CGC7 | CGCFAM_00077 | Yes | 7 | 2 | |
| Rep_194_CGC11 | CGCFAM_00164 | Yes | 4 | 1 | |
| Rep_194_CGC42 | CGCFAM_00310 | Yes | 7 | 1 | |
| Rep_194_CGC26 | CGCFAM_00352 | Yes | 8 | 2 | |
| Rep_194_CGC25 | CGCFAM_00544 | Yes | 14 | 8 | |
| Rep_194_CGC41 | CGCFAM_00602 | Yes | 4 | 1 | |
| Rep_194_CGC50 | CGCFAM_00608 | Yes | 7 | 4 | |
| Rep_194_CGC45 | CGCFAM_01181 | Yes | 4 | 1 | |
| Rep_194_CGC48 | CGCFAM_01363 | Yes | 11 | 2 | |
| Rep_194_CGC38 | CGCFAM_01729 | Yes | 8 | 2 | |
| Rep_194_CGC49 | CGCFAM_02251 | Yes | 7 | 1 | |
| Rep_194_CGC16 | CGCFAM_02265 | Yes | 4 | 2 | |
| Rep_194_CGC23 | CGCFAM_02553 | Yes | 4 | 2 | |
| Rep_194_CGC2 | CGCFAM_02873 | Yes | 7 | 4 | |
| Rep_194_CGC40 | CGCFAM_03350 | Yes | 3 | 1 |
Top CAZyme Families