dbCAN Logo

Cluster: Rep_194_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_194_c_6 Rep_194_c_6_228 290529 292166 + GH29
STP Rep_194_c_6 Rep_194_c_6_229 292273 294420 - B12-binding
pfam Rep_194_c_6 Rep_194_c_6_230 294432 296291 - MM_CoA_mutase
TC Rep_194_c_6 Rep_194_c_6_231 296660 298348 + 2.A.81.1.2
pfam Rep_194_c_6 Rep_194_c_6_232 298397 299371 + OAD_gamma
pfam Rep_194_c_6 Rep_194_c_6_233 299404 299865 + Biotin_lipoyl | Biotin_lipoyl_2
TC Rep_194_c_6 Rep_194_c_6_234 299872 301029 + 3.B.1.1.2
Gene ID: Rep_194_c_6_228
Type: CAZyme
Location: 290529 - 292166 (+)
Gene ID: Rep_194_c_6_229
Type: STP
Location: 292273 - 294420 (-)
Gene ID: Rep_194_c_6_230
Type: pfam
Location: 294432 - 296291 (-)
Gene ID: Rep_194_c_6_231
Type: TC
Location: 296660 - 298348 (+)
Gene ID: Rep_194_c_6_232
Type: pfam
Location: 298397 - 299371 (+)
Gene ID: Rep_194_c_6_233
Type: pfam
Location: 299404 - 299865 (+)
Gene ID: Rep_194_c_6_234
Type: TC
Location: 299872 - 301029 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List