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Cluster: Rep_194_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_194_c_0 Rep_194_c_0_243 318447 323051 - PL11_2
NULL(UNKNOWN) Rep_194_c_0 Rep_194_c_0_244 323160 323648 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase Rep_194_c_0 Rep_194_c_0_245 323980 325398 - S09.UPW
CAZyme Rep_194_c_0 Rep_194_c_0_246 325556 328219 - CBM67 | GH78
pfam Rep_194_c_0 Rep_194_c_0_247 328348 329001 - Lipase_GDSL_2
CAZyme Rep_194_c_0 Rep_194_c_0_248 329123 330790 - GH27
NULL(UNKNOWN) Rep_194_c_0 Rep_194_c_0_249 331050 332891 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_194_c_0 Rep_194_c_0_250 332904 336191 - 1.B.14.6.1
Gene ID: Rep_194_c_0_243
Type: CAZyme
Location: 318447 - 323051 (-)
Gene ID: Rep_194_c_0_244
Type:
Location: 323160 - 323648 (-)
Gene ID: Rep_194_c_0_245
Type: peptidase
Location: 323980 - 325398 (-)
Gene ID: Rep_194_c_0_246
Type: CAZyme
Location: 325556 - 328219 (-)
Gene ID: Rep_194_c_0_247
Type: pfam
Location: 328348 - 329001 (-)
Gene ID: Rep_194_c_0_248
Type: CAZyme
Location: 329123 - 330790 (-)
Gene ID: Rep_194_c_0_249
Type:
Location: 331050 - 332891 (-)
Gene ID: Rep_194_c_0_250
Type: TC
Location: 332904 - 336191 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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