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Cluster: Rep_194_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_194_c_4 Rep_194_c_4_121 180448 180903 + 9.B.27.3.3
pfam Rep_194_c_4 Rep_194_c_4_122 180947 181744 + ZnuA
TC Rep_194_c_4 Rep_194_c_4_123 181732 182367 + 3.A.1.15.11
pfam Rep_194_c_4 Rep_194_c_4_124 182664 186038 + TMEM260-like
CAZyme Rep_194_c_4 Rep_194_c_4_125 186044 186655 + CE4
pfam Rep_194_c_4 Rep_194_c_4_126 186633 187679 + QueG_DUF1730 | Fer4_16
NULL(UNKNOWN) Rep_194_c_4 Rep_194_c_4_127 187789 188379 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_194_c_4 Rep_194_c_4_128 188405 189718 + CE8
Gene ID: Rep_194_c_4_121
Type: TC
Location: 180448 - 180903 (+)
Gene ID: Rep_194_c_4_122
Type: pfam
Location: 180947 - 181744 (+)
Gene ID: Rep_194_c_4_123
Type: TC
Location: 181732 - 182367 (+)
Gene ID: Rep_194_c_4_124
Type: pfam
Location: 182664 - 186038 (+)
Gene ID: Rep_194_c_4_125
Type: CAZyme
Location: 186044 - 186655 (+)
Gene ID: Rep_194_c_4_126
Type: pfam
Location: 186633 - 187679 (+)
Gene ID: Rep_194_c_4_127
Type:
Location: 187789 - 188379 (-)
Gene ID: Rep_194_c_4_128
Type: CAZyme
Location: 188405 - 189718 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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