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Cluster: Rep_194_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_194_c_6 Rep_194_c_6_177 220492 221616 + GH105
pfam Rep_194_c_6 Rep_194_c_6_178 221780 222184 + DUF1573 | HYDIN_VesB_CFA65-like_Ig
TC Rep_194_c_6 Rep_194_c_6_179 222425 223726 - 9.B.168.1.2
peptidase Rep_194_c_6 Rep_194_c_6_180 224487 226091 + C26.964
TC Rep_194_c_6 Rep_194_c_6_181 226131 228017 + 2.A.9.3.1
peptidase Rep_194_c_6 Rep_194_c_6_182 228097 230265 + S09.UPC
TC Rep_194_c_6 Rep_194_c_6_183 230374 232032 + 2.A.1.53.5
pfam Rep_194_c_6 Rep_194_c_6_184 232936 233883 - Exo_endo_phos_3
TC Rep_194_c_6 Rep_194_c_6_185 233957 235486 - 2.A.17.1.6
pfam Rep_194_c_6 Rep_194_c_6_186 235489 236307 - OMP_b-brl_2
CAZyme Rep_194_c_6 Rep_194_c_6_187 236319 237686 - CBM50
Gene ID: Rep_194_c_6_177
Type: CAZyme
Location: 220492 - 221616 (+)
Gene ID: Rep_194_c_6_178
Type: pfam
Location: 221780 - 222184 (+)
Gene ID: Rep_194_c_6_179
Type: TC
Location: 222425 - 223726 (-)
Gene ID: Rep_194_c_6_180
Type: peptidase
Location: 224487 - 226091 (+)
Gene ID: Rep_194_c_6_181
Type: TC
Location: 226131 - 228017 (+)
Gene ID: Rep_194_c_6_182
Type: peptidase
Location: 228097 - 230265 (+)
Gene ID: Rep_194_c_6_183
Type: TC
Location: 230374 - 232032 (+)
Gene ID: Rep_194_c_6_184
Type: pfam
Location: 232936 - 233883 (-)
Gene ID: Rep_194_c_6_185
Type: TC
Location: 233957 - 235486 (-)
Gene ID: Rep_194_c_6_186
Type: pfam
Location: 235489 - 236307 (-)
Gene ID: Rep_194_c_6_187
Type: CAZyme
Location: 236319 - 237686 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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