Cluster: Rep_194_CGC31
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 11
- Substrate:
- Genome ID: Rep_194
- CGC Family ID: CGCFAM_00005
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_194_c_4 | Rep_194_c_4_305 | 402393 | 403073 | - | 9.B.18.1.3 |
| CAZyme | Rep_194_c_4 | Rep_194_c_4_306 | 403060 | 404202 | - | GT4 |
| NULL(UNKNOWN) | Rep_194_c_4 | Rep_194_c_4_307 | 404202 | 405188 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_194_c_4 | Rep_194_c_4_308 | 405511 | 406776 | - | GT4 |
| CAZyme | Rep_194_c_4 | Rep_194_c_4_309 | 406740 | 407879 | - | GT4 |
| pfam | Rep_194_c_4 | Rep_194_c_4_310 | 407997 | 408902 | - | DDE_Tnp_1 | DDE_Tnp_1_3 |
| CAZyme | Rep_194_c_4 | Rep_194_c_4_311 | 409010 | 409810 | - | GT11 |
| pfam | Rep_194_c_4 | Rep_194_c_4_312 | 409927 | 411216 | + | DDE_Tnp_1 | DDE_Tnp_1_4 |
| CAZyme | Rep_194_c_4 | Rep_194_c_4_313 | 411521 | 412246 | - | GT32 |
| CAZyme | Rep_194_c_4 | Rep_194_c_4_314 | 412248 | 413243 | - | GT2 |
| NULL(UNKNOWN) | Rep_194_c_4 | Rep_194_c_4_315 | 413247 | 414554 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_194_c_4 | Rep_194_c_4_316 | 414561 | 415469 | - | GT2 |
| CAZyme | Rep_194_c_4 | Rep_194_c_4_317 | 415554 | 416633 | - | GT2 |
| NULL(UNKNOWN) | Rep_194_c_4 | Rep_194_c_4_318 | 416648 | 417685 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_194_c_4 | Rep_194_c_4_319 | 417981 | 419003 | - | GT2 |
| pfam | Rep_194_c_4 | Rep_194_c_4_320 | 419035 | 420099 | - | Glycos_transf_2 |
| pfam | Rep_194_c_4 | Rep_194_c_4_321 | 420337 | 421626 | + | DDE_Tnp_1 | DDE_Tnp_1_4 |
| CAZyme | Rep_194_c_4 | Rep_194_c_4_322 | 421841 | 422863 | - | GT2 |
| pfam | Rep_194_c_4 | Rep_194_c_4_323 | 423409 | 424698 | + | DDE_Tnp_1 | DDE_Tnp_1_4 |
| CAZyme | Rep_194_c_4 | Rep_194_c_4_324 | 424845 | 425438 | - | GT2 |
Gene ID: Rep_194_c_4_305
Type: TC
Location: 402393 - 403073 (-)
Type: TC
Location: 402393 - 403073 (-)
Gene ID: Rep_194_c_4_306
Type: CAZyme
Location: 403060 - 404202 (-)
Type: CAZyme
Location: 403060 - 404202 (-)
Gene ID: Rep_194_c_4_307
Type:
Location: 404202 - 405188 (-)
Type:
Location: 404202 - 405188 (-)
Gene ID: Rep_194_c_4_308
Type: CAZyme
Location: 405511 - 406776 (-)
Type: CAZyme
Location: 405511 - 406776 (-)
Gene ID: Rep_194_c_4_309
Type: CAZyme
Location: 406740 - 407879 (-)
Type: CAZyme
Location: 406740 - 407879 (-)
Gene ID: Rep_194_c_4_310
Type: pfam
Location: 407997 - 408902 (-)
Type: pfam
Location: 407997 - 408902 (-)
Gene ID: Rep_194_c_4_311
Type: CAZyme
Location: 409010 - 409810 (-)
Type: CAZyme
Location: 409010 - 409810 (-)
Gene ID: Rep_194_c_4_312
Type: pfam
Location: 409927 - 411216 (+)
Type: pfam
Location: 409927 - 411216 (+)
Gene ID: Rep_194_c_4_313
Type: CAZyme
Location: 411521 - 412246 (-)
Type: CAZyme
Location: 411521 - 412246 (-)
Gene ID: Rep_194_c_4_314
Type: CAZyme
Location: 412248 - 413243 (-)
Type: CAZyme
Location: 412248 - 413243 (-)
Gene ID: Rep_194_c_4_315
Type:
Location: 413247 - 414554 (-)
Type:
Location: 413247 - 414554 (-)
Gene ID: Rep_194_c_4_316
Type: CAZyme
Location: 414561 - 415469 (-)
Type: CAZyme
Location: 414561 - 415469 (-)
Gene ID: Rep_194_c_4_317
Type: CAZyme
Location: 415554 - 416633 (-)
Type: CAZyme
Location: 415554 - 416633 (-)
Gene ID: Rep_194_c_4_318
Type:
Location: 416648 - 417685 (-)
Type:
Location: 416648 - 417685 (-)
Gene ID: Rep_194_c_4_319
Type: CAZyme
Location: 417981 - 419003 (-)
Type: CAZyme
Location: 417981 - 419003 (-)
Gene ID: Rep_194_c_4_320
Type: pfam
Location: 419035 - 420099 (-)
Type: pfam
Location: 419035 - 420099 (-)
Gene ID: Rep_194_c_4_321
Type: pfam
Location: 420337 - 421626 (+)
Type: pfam
Location: 420337 - 421626 (+)
Gene ID: Rep_194_c_4_322
Type: CAZyme
Location: 421841 - 422863 (-)
Type: CAZyme
Location: 421841 - 422863 (-)
Gene ID: Rep_194_c_4_323
Type: pfam
Location: 423409 - 424698 (+)
Type: pfam
Location: 423409 - 424698 (+)
Gene ID: Rep_194_c_4_324
Type: CAZyme
Location: 424845 - 425438 (-)
Type: CAZyme
Location: 424845 - 425438 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella intestinigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.