Genome Details
Selected Rep_genome_ID: MGYG000004866
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_B
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4552 | 2,364,622 | 92.51% | 0.396% | United Republic of Tanzania | Africa | HRGM |
| MGYG000004866 | 2,559,588 | 96.66% | 0.68% | China | Asia | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-A-D_F_2_1628.131 | 2,426,779 | 92.89% | 0% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000004866_CGC21 | CGCFAM_00004 | Yes | 7 | 2 | alpha-glucan |
| MGYG000004866_CGC6 | CGCFAM_00041 | Yes | 11 | 3 | |
| MGYG000004866_CGC31 | CGCFAM_00047 | Yes | 9 | 3 | |
| MGYG000004866_CGC18 | CGCFAM_00054 | Yes | 5 | 3 | |
| MGYG000004866_CGC8 | CGCFAM_00113 | Yes | 5 | 1 | |
| MGYG000004866_CGC28 | CGCFAM_02008 | Yes | 5 | 2 | |
| MGYG000004866_CGC22 | CGCFAM_03126 | Yes | 9 | 2 | |
| MGYG000004866_CGC17 | CGCFAM_03447 | Yes | 4 | 1 | |
| MGYG000004866_CGC10 | CGCFAM_05590 | Yes | 7 | 1 | |
| MGYG000004866_CGC27 | CGCFAM_06193 | Yes | 3 | 1 | |
| MGYG000004866_CGC9 | CGCFAM_06206 | Yes | 4 | 1 | |
| MGYG000004866_CGC20 | CGCFAM_11049 | Yes | 15 | 5 |
Top CAZyme Families