Cluster: MGYG000004866_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004866
- CGC Family ID: CGCFAM_02008
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004866_47 | MGYG000004866_47_2 | 1914 | 2831 | + | 3.A.1.1.29 |
| TC | MGYG000004866_47 | MGYG000004866_47_3 | 2844 | 3740 | + | 3.A.1.1.29 |
| TC | MGYG000004866_47 | MGYG000004866_47_4 | 3769 | 4749 | + | 8.A.5.1.5 |
| CAZyme | MGYG000004866_47 | MGYG000004866_47_5 | 4751 | 5890 | + | GH33 |
| CAZyme | MGYG000004866_47 | MGYG000004866_47_6 | 6950 | 7984 | + | GH33 |
Gene ID: MGYG000004866_47_2
Type: TC
Location: 1914 - 2831 (+)
Type: TC
Location: 1914 - 2831 (+)
Gene ID: MGYG000004866_47_3
Type: TC
Location: 2844 - 3740 (+)
Type: TC
Location: 2844 - 3740 (+)
Gene ID: MGYG000004866_47_4
Type: TC
Location: 3769 - 4749 (+)
Type: TC
Location: 3769 - 4749 (+)
Gene ID: MGYG000004866_47_5
Type: CAZyme
Location: 4751 - 5890 (+)
Type: CAZyme
Location: 4751 - 5890 (+)
Gene ID: MGYG000004866_47_6
Type: CAZyme
Location: 6950 - 7984 (+)
Type: CAZyme
Location: 6950 - 7984 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.