Cluster: MGYG000004866_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004866
- CGC Family ID: CGCFAM_00054
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004866_23 | MGYG000004866_23_38 | 35184 | 36764 | - | GH36 |
| TC | MGYG000004866_23 | MGYG000004866_23_39 | 36766 | 38148 | - | 2.A.2.1.1 |
| CAZyme | MGYG000004866_23 | MGYG000004866_23_40 | 38139 | 40511 | - | GH2 |
| STP | MGYG000004866_23 | MGYG000004866_23_41 | 40508 | 41077 | - | TetR_N |
| CAZyme | MGYG000004866_23 | MGYG000004866_23_42 | 41274 | 42212 | - | GH13_29 |
Gene ID: MGYG000004866_23_38
Type: CAZyme
Location: 35184 - 36764 (-)
Type: CAZyme
Location: 35184 - 36764 (-)
Gene ID: MGYG000004866_23_39
Type: TC
Location: 36766 - 38148 (-)
Type: TC
Location: 36766 - 38148 (-)
Gene ID: MGYG000004866_23_40
Type: CAZyme
Location: 38139 - 40511 (-)
Type: CAZyme
Location: 38139 - 40511 (-)
Gene ID: MGYG000004866_23_41
Type: STP
Location: 40508 - 41077 (-)
Type: STP
Location: 40508 - 41077 (-)
Gene ID: MGYG000004866_23_42
Type: CAZyme
Location: 41274 - 42212 (-)
Type: CAZyme
Location: 41274 - 42212 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.